1. Gene
  2. HDLBP - high density lipoprotein binding protein Gene

HDLBP - high density lipoprotein binding protein Gene

Homo sapiens

Also known as HBP; VGL; PRO2900

Gene ID: 3069 | Gene type: protein coding

About HDLBP

Cytogenetic location: 2q37.3 Genomic coordinates (GRCh38): 2:241,227,291-241,315,672 (from NCBI)

This gene has 47 transcripts (splice variants), 212 orthologues and 2 paralogues. Ubiquitous expression in testis (RPKM 89.6), thyroid (RPKM 63.1) and 25 other tissues.

Summary

The protein encoded by this gene binds high density lipoprotein (HDL) and may function to regulate excess Cholesterol levels in cells. The encoded protein also binds RNA and can induce heterochromatin formation. [provided by RefSeq, Mar 2016]

HDLBP Products(6)

mRNA Protein Name
NM_001243900.3 NP_001230829.1 vigilin isoform b
NM_001320965.3 NP_001307894.1 vigilin isoform a
NM_001320966.3 NP_001307895.1 vigilin isoform a
NM_001320967.3 NP_001307896.1 vigilin isoform c
NM_005336.6 NP_005327.1 vigilin isoform a
NM_203346.6 NP_976221.1 vigilin isoform a

HDLBP Protein Structure

KH_1

KH_1: KH domain (153 - 210)

KH_1

KH_1: KH domain (225 - 284)

KH_1

KH_1: KH domain (298 - 355)

KH_1

KH_1: KH domain (369 - 424)

KH_1

KH_1: KH domain (439 - 496)

KH_1

KH_1: KH domain (512 - 568)

KH_1

KH_1: KH domain (584 - 643)

KH_1

KH_1: KH domain (656 - 716)

KH_1

KH_1: KH domain (731 - 789)

KH_1

KH_1: KH domain (804 - 863)

KH_1

KH_1: KH domain (879 - 966)

KH_1

KH_1: KH domain (974 - 1033)

KH_1

KH_1: KH domain (1055 - 1117)

KH_1

KH_1: KH domain (1133 - 1190)

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  • 1268 a.a.
Protein Preferred Names Protein Names

vigilin

HDL-binding protein

Related Diseases

Diseases Alias
Chromosome 2q37 Deletion Syndrome

Albright Hereditary Osteodystrophy-Like Syndrome

2q37 Microdeletion Syndrome

Brachydactyly-Intellectual Disability Syndrome

Deletion 2q37

2q37 Deletion Syndrome

Brachydactyly-Mental Retardation Syndrome

Bdmr

Albright Hereditary Osteodystrophy Type 3

Del(2)(Q37)

Monosomy 2q37qter

Albright'S Hereditary Osteodystrophy-Like Syndrome

Monosomy 2q37

Chromosome Deletion Syndrome 2q37

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Macaca mulatta HDLBP VGNC VGNC:73361
Rattus norvegicus HDLBP RGD RGD:620962
Bos taurus HDLBP VGNC VGNC:55051
Mus musculus HDLBP MGD MGI:99256
Felis catus HDLBP VGNC VGNC:67551
Canis familiaris HDLBP VGNC VGNC:41631