1. Gene
  2. COPA - COPI coat complex subunit alpha Gene

COPA - COPI coat complex subunit alpha Gene

Homo sapiens

Also known as AILJK; HEP-COP; alpha-COP

Gene ID: 1314 | Gene type: protein coding

About COPA

Cytogenetic location: 1q23.2 Genomic coordinates (GRCh38): 1:160,288,594-160,343,250 (from NCBI)

This gene has 35 transcripts (splice variants), 217 orthologues, 1 paralogue and is associated with 2 phenotypes. Ubiquitous expression in thyroid (RPKM 39.8), colon (RPKM 29.3) and 25 other tissues.

Summary

In eukaryotic cells, protein transport between the endoplasmic reticulum and Golgi compartments is mediated in part by non-clathrin-coated vesicular coat proteins (COPs). Seven coat proteins have been identified, and they represent subunits of a complex known as coatomer. The subunits are designated alpha-COP, beta-COP, beta-prime-COP, gamma-COP, delta-COP, epsilon-COP, and zeta-COP. The alpha-COP, encoded by COPA, shares high sequence similarity with RET1P, the alpha subunit of the coatomer complex in yeast. Also, the N-terminal 25 Amino acids of alpha-COP encode the bioactive peptide, xenin, which stimulates exocrine pancreatic secretion and may act as a gastrointestinal hormone. Alternative splicing results in multiple splice forms encoding distinct isoforms. [provided by RefSeq, Jul 2008]

COPA Products(2)

mRNA Protein Name
NM_001098398.2 NP_001091868.1 coatomer subunit alpha isoform 1
NM_004371.4 NP_004362.2 coatomer subunit alpha isoform 2

COPA Protein Structure

WD40

WD40: WD domain, G-beta repeat (3 - 37)

WD40

WD40: WD domain, G-beta repeat (44 - 79)

WD40

WD40: WD domain, G-beta repeat (84 - 121)

WD40

WD40: WD domain, G-beta repeat (126 - 163)

WD40

WD40: WD domain, G-beta repeat (197 - 232)

WD40

WD40: WD domain, G-beta repeat (244 - 277)

Coatomer_WDAD

Coatomer_WDAD: Coatomer WD associated region (342 - 767)

COPI_C

COPI_C: Coatomer (COPI) alpha subunit C-terminus (815 - 1224)

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  • 1224 a.a.
Protein Preferred Names Protein Names

coatomer subunit alpha

alpha coat protein

Related Diseases

Diseases Alias
Autoimmune Interstitial Lung, Joint, And Kidney Disease

Autoimmune Interstitial Lung Disease-Arthritis Syndrome

AILJK

Copa Syndrome

Parainfluenza Virus Type 3

Human Parainfluenza Virus Type 3

Piv3

Lung Disease

Lung Diseases

Disorder Of Lung

Abnormality Of The Lung

Interstitial Lung Disease

Ild

Lung Diseases, Interstitial

Lung Diseases Interstitial

Interstitial Lung Diseases

Lipid Pneumonia

Exogenous Lipoid Pneumonia

Lipoid Pneumonitis

Pneumonia, Lipid

Pneumonia Lipid

Lipoid Pneumonia

Familial Cold Autoinflammatory Syndrome 3

Plaid

Familial Atypical Cold Urticaria

Facu

FCAS3

Antibody Deficiency And Immune Dysregulation, Plcg2-Associated

Plcg2-Associated Antibody Deficiency And Immune Dysregulation

Familial Cold Urticaria With Common Variable Immunodeficiency

Plcg2 Associated Antibody Deficiency And Immune Dysregulation

Antibody Deficiency And Immune Dysregulation Placg2-Associated

Autoinflammatory Syndrome, Cold, Familial, Type 3

Ventilation Pneumonitis

Air-Conditioner And Humidifier Lung

Humidifier Lung

Air Conditioner Lung

Air Humidifier Pneumonitis

Sauna Takers Lung

Air Conditioner Pneumonitis

Humidifier Pneumonitis

Air Humidifier Lung

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma