1. Gene
  2. PCDHB6 - protocadherin beta 6 Gene

PCDHB6 - protocadherin beta 6 Gene

Homo sapiens

Also known as PCDH-BETA6

Gene ID: 56130 | Gene type: protein coding

About PCDHB6

Cytogenetic location: 5q31.3 Genomic coordinates (GRCh38): 5:141,150,057-141,153,287 (from NCBI)

This gene has 2 transcripts (splice variants), 53 orthologues and 61 paralogues.

Summary

This gene is a member of the protocadherin beta gene cluster, one of three related gene clusters tandemly linked on chromosome five. The gene clusters demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters. Unlike the alpha and gamma clusters, the transcripts from these genes do not share common 3' exons. These neural cadherin-like cell adhesion proteins are integral plasma membrane proteins that most likely play a critical role in the establishment and function of specific cell-cell neural connections. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]

PCDHB6 Products(2)

mRNA Protein Name
NM_001303145.2 NP_001290074.1 protocadherin beta-6 isoform 2
NM_018939.4 NP_061762.2 protocadherin beta-6 isoform 1 precursor

PCDHB6 Protein Structure

Cadherin_2

Cadherin_2: Cadherin-like (29 - 111)

Cadherin

Cadherin: Cadherin domain (153 - 232)

Cadherin

Cadherin: Cadherin domain (246 - 335)

Cadherin

Cadherin: Cadherin domain (354 - 439)

Cadherin

Cadherin: Cadherin domain (454 - 549)

Cadherin

Cadherin: Cadherin domain (578 - 659)

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  • 794 a.a.
Protein Preferred Names Protein Names

protocadherin beta-6

Orthologs Information

Species Symbol Source ID
Mus musculus PCDHB6 MGD MGI:2136748
Rattus norvegicus PCDHB6 RGD RGD:11376545