1. Gene
  2. SEC13 - SEC13 homolog, nuclear pore and COPII coat complex component Gene

SEC13 - SEC13 homolog, nuclear pore and COPII coat complex component Gene

Homo sapiens

Also known as SEC13R; npp-20; SEC13L1; D3S1231E

Gene ID: 6396 | Gene type: protein coding

About SEC13

Cytogenetic location: 3p25.3 Genomic coordinates (GRCh38): 3:10,300,931-10,321,112 (from NCBI)

This gene has 19 transcripts (splice variants), 220 orthologues and 1 paralogue. Ubiquitous expression in duodenum (RPKM 31.7), small intestine (RPKM 28.0) and 25 other tissues.

Summary

The protein encoded by this gene belongs to the SEC13 family of WD-repeat proteins. It is a constituent of the endoplasmic reticulum and the nuclear pore complex. It has similarity to the yeast SEC13 protein, which is required for vesicle biogenesis from endoplasmic reticulum during the transport of proteins. Multiple alternatively spliced transcript variants have been found. [provided by RefSeq, Oct 2008]

SEC13 Products(5)

mRNA Protein Name
NM_001136026.3 NP_001129498.1 protein SEC13 homolog isoform 3
NM_001136232.3 NP_001129704.1 protein SEC13 homolog isoform 2
NM_001278946.2 NP_001265875.1 protein SEC13 homolog isoform 5
NM_030673.4 NP_109598.2 protein SEC13 homolog isoform 4
NM_183352.3 NP_899195.1 protein SEC13 homolog isoform 1

SEC13 Protein Structure

WD40

WD40: WD domain, G-beta repeat (5 - 41)

WD40

WD40: WD domain, G-beta repeat (51 - 86)

WD40

WD40: WD domain, G-beta repeat (93 - 130)

WD40

WD40: WD domain, G-beta repeat (140 - 195)

WD40

WD40: WD domain, G-beta repeat (202 - 243)

WD40

WD40: WD domain, G-beta repeat (263 - 290)

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  • 300
  • 322 a.a.
Protein Preferred Names Protein Names

protein SEC13 homolog

GATOR complex protein SEC13

Related Diseases

Diseases Alias
Craniolenticulosutural Dysplasia

Boyadjiev-Jabs Syndrome

CLSD

Cranio-Lenticulo-Sutural Dysplasia

Cranio-Lenticulo-Sutural Dysplasia, Clsd

Anemia, Congenital Dyserythropoietic, Type Ii

Congenital Dyserythropoietic Anemia Type Ii

CDAN2

Cda Ii

Hereditary Erythroblastic Multinuclearity With Positive Acidified-Serum Test

Cda Type Ii

Congenital Dyserythropoietic Anemia Type 2

Hereditary Erythroblastic Multinuclearity With A Positive Acidified-Serum Test

Sec23b-Cdg

Congenital Dyserythropoietic Anemia, Type Ii

Dyserythropoietic Anemia, Hempas Type

Hempas

Cda Type 2

Dyserythropoietic Anemia, Congenital, Type Ii

Cda, Type Ii

Congenital Dyserythropoietic Anaemia Type 2

Congenital Dyserythropoietic Anaemia Type Ii

Anemia, Dyserythropoietic, Congenital Type 2

Hempas Anemia

Dyserythropoietic Anemia, Congenital Type 2

Anemia, Congenital Dyserythropoietic, 2

Dyserythropoietic Anemia Hempas Type

Anemia, Dyserythropoietic Congenital, Type Ii

Anemia, Dyserythropoietic, Congenital, Type Ii

Chylomicron Retention Disease

CMRD

Anderson Disease

Lipid Transport Defect Of Intestine

Hypobetalipoproteinemia With Accumulation Of Apolipoprotein B-Like Protein In Intestinal Cells

Andd

Anderson Syndrome

Crd

Andersons Disease

Malabsorption Syndrome

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Macaca mulatta SEC13 VGNC VGNC:77149
Felis catus SEC13 VGNC VGNC:64960
Bos taurus SEC13 VGNC VGNC:34403
Rattus norvegicus SEC13 RGD RGD:1359555
Canis familiaris SEC13 VGNC VGNC:45962
Mus musculus SEC13 MGD MGI:99832