1. Gene
  2. Pkd1 - polycystin 1, transient receptor potential channel interacting Gene

Pkd1 - polycystin 1, transient receptor potential channel interacting Gene

Mus musculus

Also known as PC1; mFLJ00285

Gene ID: 18763 | Gene type: protein coding

About Pkd1

Chromosome 17: 24,768,808-24,815,482 forward strand.GRCm39:CM001010.3

This gene has 10 transcripts (splice variants), 194 orthologues, 10 paralogues and is associated with 131 phenotypes. Ubiquitous expression in ovary adult (RPKM 37.1), lung adult (RPKM 32.2) and 25 other tissues.

Summary

Enables Calcium Channel activity. Involved in several processes, including cytoplasmic sequestering of transcription factor; placenta development; and protein export from nucleus. Acts upstream of or within several processes, including animal organ development; circulatory system development; and receptor signaling pathway via JAK-STAT. Located in several cellular components, including Golgi apparatus; cell surface; and motile cilium. Part of polycystin complex. Is expressed in several structures, including alimentary system; cardiovascular system; central nervous system; genitourinary system; and respiratory system. Used to study autosomal recessive polycystic kidney disease; hypertrophic cardiomyopathy; and polycystic kidney disease 1. Human ortholog(s) of this gene implicated in autosomal dominant polycystic kidney disease; intracranial aneurysm; and polycystic kidney disease 1. Orthologous to human PKD1 (polycystin 1, transient receptor potential channel interacting). [provided by Alliance of Genome Resources, Apr 2022]

Pkd1 Products(1)

mRNA Protein Name
NM_013630.3 NP_038658.2 polycystin-1 precursor

Pkd1 Protein Structure

LRRNT

LRRNT: smart00013 (31 - 70)

LRR_8

LRR_8: pfam13855 (60 - 126)

LRR_1

LRR_1: sd00031 (69 - 91)

LRR_1

LRR_1: sd00031 (92 - 115)

PCC

PCC: cl28216 (96 - 2722)

LRR_1

LRR_1: sd00031 (116 - 128)

GPS

GPS: cl02559 (3002 - 3051)

PLAT_polycystin

PLAT_polycystin: cd01752 (3109 - 3228)

PKD_channel

PKD_channel: cl37568 (3702 - 4102)

  • 0
  • 700
  • 1400
  • 2100
  • 2800
  • 3500
  • 4293 a.a.
Protein Preferred Names Protein Names

polycystin-1

autosomal dominant polycystic kidney disease 1 protein homolog

polycystic kidney disease 1 homolog

polycystic kidney disease 1 homolog

polycystin-1

polycystin 1, transient receptor poteintial channel interacting

Orthologs Information

Species Symbol Source ID
Homo sapiens Pkd1 NCBI NCBI:5310