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  2. 1,3-Disubstituted urea derivatives: Synthesis, antimicrobial activity evaluation and in silico studies

1,3-Disubstituted urea derivatives: Synthesis, antimicrobial activity evaluation and in silico studies

  • Bioorg Chem. 2020 Sep;102:104104. doi: 10.1016/j.bioorg.2020.104104.
Miyase Gözde Gündüz 1 Sümeyye Buran Uğur 2 Funda Güney 2 Ceren Özkul 3 Vagolu Siva Krishna 4 Serdal Kaya 5 Dharmarajan Sriram 4 Şengül Dilem Doğan 6
Affiliations

Affiliations

  • 1 Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Hacettepe University, Sıhhiye, 06100 Ankara, Turkey.
  • 2 Department of Basic Sciences, Faculty of Pharmacy, Erciyes University, Kayseri, Turkey.
  • 3 Department of Pharmaceutical Microbiology, Faculty of Pharmacy, Hacettepe University, Sıhhiye, 06100 Ankara, Turkey.
  • 4 Department of Pharmacy, Birla Institute of Technology and Science-Pilani, Hyderabad 500078, India.
  • 5 Department of Chemistry, Faculty of Arts and Sciences, Giresun University, 28200 Giresun, Turkey; Department of Aeronautical, Faculty of Aviation and Space Sciences, Necmettin Erbakan University, 42140 Konya, Turkey.
  • 6 Department of Basic Sciences, Faculty of Pharmacy, Erciyes University, Kayseri, Turkey. Electronic address: [email protected].
Abstract

The development of new antimicrobial compounds is in high demand to overcome the emerging drug resistance against infectious microbial pathogens. In the present study, we carried out the extensive antimicrobial screening of disubstituted urea derivatives. In addition to the classical synthesis of urea compounds by the reaction of amines and isocyanates, we also applied a new route including bromination, oxidation and azidination reactions, respectively, to convert 2-amino-3-methylpyridine to 1,3-disubstituted urea derivatives using various amines. The evaluation of antimicrobial activities against various Bacterial strains, Candida albicans as well as Mycobacterium tuberculosis resulted in the discovery of new active molecules. Among them, two compounds, which have the lowest MIC values on Pseudomonas aeruginosa, were further evaluated for their inhibition capacities of biofilm formation. In order to evaluate their potential mechanism of biofilm inhibition, these two compounds were docked into the active site of LasR, which is the transcriptional regulator of Bacterial signaling mechanism known as quorum sensing. Finally, the theoretical parameters of the bioactive molecules were calculated to establish their drug-likeness properties.

Keywords

Antibacterial; Antifungal; Biofilm; Molecular docking; Quorum sensing; Tuberculosis.

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