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  2. Engineered probiotics limit CNS autoimmunity by stabilizing HIF-1α in dendritic cells

Engineered probiotics limit CNS autoimmunity by stabilizing HIF-1α in dendritic cells

  • bioRxiv. 2023 Mar 21:2023.03.17.532101. doi: 10.1101/2023.03.17.532101.
Liliana M Sanmarco Joseph M Rone Carolina M Polonio Federico Giovannoni Gonzalo Fernandez Lahore Kylynne Ferrara Cristina Gutierrez-Vazquez Ning Li Anna Sokolovska Agustin Plasencia Camilo Faust Akl Payal Nanda Evelin S Heck Zhaorong Li Hong-Gyun Lee Chun-Cheih Chao Claudia M Rejano-Gordillo Pedro H Fonseca-Castro Tomer Illouz Mathias Linnerbauer Jessica E Kenison Rocky M Barilla Daniel Farrenkopf Gavin Piester Lucas Dailey Vijay K Kuchroo David Hava Michael A Wheeler Clary Clish Roni Nowarski Eduardo Balsa Jose M Lora Francisco J Quintana
Abstract

Dendritic cells (DCs) control the generation of self-reactive pathogenic T cells. Thus, DCs are considered attractive therapeutic targets for autoimmune diseases. Using single-cell and bulk transcriptional and metabolic analyses in combination with cell-specific gene perturbation studies we identified a negative feedback regulatory pathway that operates in DCs to limit immunopathology. Specifically, we found that lactate, produced by activated DCs and Other immune cells, boosts NDUFA4L2 expression through a mechanism mediated by HIF-1α. NDUFA4L2 limits the production of mitochondrial Reactive Oxygen Species that activate XBP1-driven transcriptional modules in DCs involved in the control of pathogenic autoimmune T cells. Moreover, we engineered a probiotic that produces lactate and suppresses T-cell autoimmunity in the central nervous system via the activation of HIF-1α/NDUFA4L2 signaling in DCs. In summary, we identified an immunometabolic pathway that regulates DC function, and developed a synthetic probiotic for its therapeutic activation.

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