1. Academic Validation
  2. Identification of β-cycloidal-derived mono-carbonyl curcumin analogs as potential interleukin-6 inhibitor to treat wound healing through QSAR, molecular docking, MD simulation, MM-GBSA calculation

Identification of β-cycloidal-derived mono-carbonyl curcumin analogs as potential interleukin-6 inhibitor to treat wound healing through QSAR, molecular docking, MD simulation, MM-GBSA calculation

  • J Biomol Struct Dyn. 2024 Mar 23:1-12. doi: 10.1080/07391102.2024.2331089.
Md Shaekh Forid 1 Rajesh B Patil 2 Miah Roney 3 4 A K M Moyeenul Huq 4 Mohd Hamzah Bin Mohd Nasir 5 Mohd Fadhlizil Fasihi Mohd Aluwi 3 4 Muhammad Saupi Azuri 1 Wan Maznah Binti Wan Ishak 1
Affiliations

Affiliations

  • 1 Faculty of Chemical and Process Engineering Technology, Universiti Malaysia Pahang Al-Sultan Abdullah, Lebuhraya Persiaran Tun Khalil Yaakob, Kuantan, Pahang, Malaysia.
  • 2 Department of Pharmaceutical Chemistry, Sinhgad Technical Education Societys, Sinhgad College of Pharmacy, Pune, Maharashtra, India.
  • 3 Faculty of Industrial Sciences and Technology, Universiti Malaysia Pahang Al-Sultan Abdullah, Lebuhraya Persiaran Tun Khalil Yaakob, Kuantan, Pahang, Malaysia.
  • 4 Bio Aromatic Research Centre, Universiti Malaysia Pahang Al-Sultan Abdullah, Lebuhraya Persiaran Tun Khalil Yaakob, Kuantan, Pahang, Malaysia.
  • 5 Department of Biotechnology, Kulliyyah of Science, International Islamic University of Malaysia (IIUM) Kuantan Campus, Jalan Sultan Ahmad Shah, Kuantan, Pahang Darul Makmur, Malaysia.
Abstract

Interleukin-6 (IL-6) is a cytokine that involved in the different phases of wound healing. It is responsible for promoting inflammation, regulating tissue repair scar formation, stimulating the production of extracellular matrix components and recruiting immune cells to the wound site. Therefore, suppressing IL-6 is beneficial for wound healing. However, no small molecules are currently available in the market against the IL-6. As a result, this research gap motivates us to find a potential inhibitor. This study aimed to investigate the wound healing potential of novel β-cycloidal-derived mono-carbonyl curcumin analogs reported in the literature through screening a series of computational studies. The calculated pIC50 value of 18 compounds (below 10) showed that all compounds may have potential therapeutic efficacy. Molecular docking studies revealed that compound C12 (-45.6044 kcal/mol) bound most strongly in the active site of IL-6 compared to the FDA-approved drug clindamycin (-42.3223). The Molecular Dynamic (MD) simulation displayed that lead compound C12 had the highest stability in the active site of IL-6 compared to the reference drug clindamycin. Furthermore, MMGBSA results indicated that C12 (-20.28 kcal/mol) had the highest binding energy compared to clindamycin (-8.36 kcal/mol). The ADMET analysis predicted that C12 are favourable for drug candidates. This study recommended compound C12 as a lead IL-6 Inhibitor for future testing and development as therapeutics for wound healing.Communicated by Ramaswamy H. Sarma.

Keywords

IL-6; MD simulation; QSAR; Wound healing; molecular docking; β-cycloidal-derived mono-carbonyl curcumin analogs.

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