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  2. Kinase-catalyzed crosslinking: A comparison of ATP-crosslinker analogs

Kinase-catalyzed crosslinking: A comparison of ATP-crosslinker analogs

  • Bioorg Med Chem Lett. 2024 Sep 1:109:129841. doi: 10.1016/j.bmcl.2024.129841.
Hannah J Bremer 1 Andrew A Herppich 1 Mary Kay H Pflum 2
Affiliations

Affiliations

  • 1 Wayne State University, Department of Chemistry, 5101 Cass Ave., Detroit, MI 48202, United States.
  • 2 Wayne State University, Department of Chemistry, 5101 Cass Ave., Detroit, MI 48202, United States. Electronic address: [email protected].
Abstract

Protein phosphorylation is catalyzed by kinases to regulate cellular events and disease states. Identifying kinase-substrate relationships represents a powerful strategy to understand Cell Biology and disease yet remains challenging due to the rapid dynamics of phosphorylation. Over the last decade, several γ-phosphoryl modified ATP analogs containing crosslinkers were developed to covalently conjugate kinases, their substrates, and their associated proteins for subsequent characterization. Here, kinetics and crosslinking experiments demonstrated that the UV-activated analogs, ATP-aryl azide and ATP-benzophenone, offered the most robust crosslinking, whereas electrophilic ATP-aryl fluorosulfate promoted the most effective proximity-enabled crosslinking. The data will guide future applications of kinase-catalyzed crosslinking to study normal and disease biology.

Keywords

ATP analogs; Crosslinking; Kinase; Kinase substrates.

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