SLC4A10 - solute carrier family 4 member 10 Gene

Also Known as NCBE; NBCn2

Species: Homo sapiens

Gene Type: protein coding
Gene ID: 57282

About SLC4A10

Cytogenetic location: 2q24.2 Genomic coordinates (GRCh38): 2:161,624,416-161,985,270 (from NCBI)

This gene has 12 transcripts (splice variants), 283 orthologues and 9 paralogues. Biased expression in brain (RPKM 21.0) and adrenal (RPKM 1.0).

Summary

This gene belongs to a small family of sodium-coupled bicarbonate transporters (NCBTs) that regulate the intracellular pH of neurons, the secretion of bicarbonate ions across the choroid plexus, and the pH of the brain extracellular fluid. The protein encoded by this gene was initially identified as a sodium-driven chloride bicarbonate exchanger (NCBE) though there is now evidence that its sodium/bicarbonate cotransport activity is independent of any chloride ion countertransport under physiological conditions. This gene is now classified as a member A10 of the SLC4 family of transmembrane solute carriers. Alternative splicing results in multiple transcript variants encoding distinct isoforms.[provided by RefSeq, May 2010]

SLC4A10 Products (19)

mRNA Protein Name
NM_001178015.2 NP_001171486.1 sodium-driven chloride bicarbonate exchanger isoform 1
NM_001178016.2 NP_001171487.1 sodium-driven chloride bicarbonate exchanger isoform 3
NM_001354440.2 NP_001341369.1 sodium-driven chloride bicarbonate exchanger isoform 4
NM_001354441.2 NP_001341370.1 sodium-driven chloride bicarbonate exchanger isoform 5
NM_001354442.2 NP_001341371.1 sodium-driven chloride bicarbonate exchanger isoform 6
NM_001354443.2 NP_001341372.1 sodium-driven chloride bicarbonate exchanger isoform 7
NM_001354444.2 NP_001341373.1 sodium-driven chloride bicarbonate exchanger isoform 8
NM_001354445.2 NP_001341374.1 sodium-driven chloride bicarbonate exchanger isoform 9
NM_001354446.2 NP_001341375.1 sodium-driven chloride bicarbonate exchanger isoform 10
NM_001354447.2 NP_001341376.1 sodium-driven chloride bicarbonate exchanger isoform 11
NM_001354448.2 NP_001341377.1 sodium-driven chloride bicarbonate exchanger isoform 12
NM_001354449.2 NP_001341378.1 sodium-driven chloride bicarbonate exchanger isoform 13
NM_001354450.2 NP_001341379.1 sodium-driven chloride bicarbonate exchanger isoform 14
NM_001354451.2 NP_001341380.1 sodium-driven chloride bicarbonate exchanger isoform 15
NM_001354453.2 NP_001341382.1 sodium-driven chloride bicarbonate exchanger isoform 16
NM_001354455.2 NP_001341384.1 sodium-driven chloride bicarbonate exchanger isoform 17
NM_001354460.2 NP_001341389.1 sodium-driven chloride bicarbonate exchanger isoform 18
NM_001354461.2 NP_001341390.1 sodium-driven chloride bicarbonate exchanger isoform 18
NM_022058.4 NP_071341.2 sodium-driven chloride bicarbonate exchanger isoform 2
Molecular Function GO Annotation Evidence References Source
enables sodium:bicarbonate symporter activity IDA
IDA: Inferred from direct assay
18319254 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

SLC4A10 Protein Structure

Band_3_cyto

Band_3_cyto: Band 3 cytoplasmic domain (146 - 434)

HCO3_cotransp

HCO3_cotransp: HCO3- transporter family (475 - 989)

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  • 1118 a.a.
Protein Preferred Names Protein Names

sodium-driven chloride bicarbonate exchanger

  • solute carrier family 4, sodium bicarbonate cotransporter-like, member 10

Related Diseases

Diseases Alias
Complex Partial Epilepsy
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  • Complex Partial Epileptic Seizure

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Corneal Dystrophy, Band-Shaped
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Corneal Dystrophy And Perceptive Deafness
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  • Corneal Dystrophy With Progressive Deafness

  • Congenital Corneal Dystrophy, Progressive Sensorineural Deafness

  • Corneal Dystrophy With Progressive Hearing Loss

  • Corneal Dystrophy-Perceptive Hearing Loss Syndrome

  • Dystrophy, Corneal, Endothelial, And Perceptive Deafness

Familial Febrile Seizures
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Deafness, Autosomal Recessive 1a
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  • Deafness, Digenic Gjb2/Gjb6

  • Autosomal Recessive Deafness 1a

  • Deafness, Autosomal Recessive, 1a

  • Deafness Digenic Gjb2/Gjb3

  • Deafness Digenic Gjb2/Gjb6

  • Deafness Neurosensory Autosomal Recessive 1

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  • Non-Syndromic Sensorineural Deafness Autosomal Recessive Type 1

  • Nsrd1

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Coffin-Siris Syndrome 1
  • Coffin-Siris Syndrome

  • Fifth Digit Syndrome

  • Css

  • CSS1

  • Mrd12

  • Mental Retardation, Autosomal Dominant 12

  • Hhid

  • Dwarfism-Onychodysplasia

  • Hypertrichosis, Hyperkeratosis, Mental Retardation, And Distinctive Facial Features

  • Autosomal Dominant Mental Retardation 12

  • Short Stature-Onychodysplasia.

  • Intellectual Disability With Absent Fifth Fingernail And Terminal Phalanx

  • Mental Retardation With Hypoplastic Fifth Fingernails And Toenails

  • Short Stature-Onychodysplasia

  • Coffin-Siris Syndrome, Type 1

  • Mental Retardation, Autosomal Dominant, Type 12

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Macaca mulatta SLC4A10 VGNC VGNC:77695
Mus musculus SLC4A10 MGD MGI:2150150
Rattus norvegicus SLC4A10 RGD RGD:631407
Felis catus SLC4A10 VGNC VGNC:65384
Canis familiaris SLC4A10 VGNC VGNC:46430
Bos taurus SLC4A10 VGNC VGNC:34890
Others SLC4A10 NCBI