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  2. Immunodeficiency, autoimmunity, and increased risk of B cell malignancy in humans with TRAF3 mutations

Immunodeficiency, autoimmunity, and increased risk of B cell malignancy in humans with TRAF3 mutations

  • Sci Immunol. 2022 Aug 12;7(74):eabn3800. doi: 10.1126/sciimmunol.abn3800.
William Rae 1 2 John M Sowerby 1 2 Dorit Verhoeven 3 4 Mariam Youssef 5 Prasanti Kotagiri 1 2 Natalia Savinykh 6 Eve L Coomber 7 Alexis Boneparth 5 Angela Chan 5 Chun Gong 8 Machiel H Jansen 3 4 Romy du Long 9 Giorgia Santilli 10 Ilenia Simeoni 11 12 Jonathan Stephens 11 12 Kejia Wu 13 Marta Zinicola 10 Hana Lango Allen 12 14 Helen Baxendale 15 Dinakantha Kumararatne 16 Effrossyni Gkrania-Klotsas 14 17 Selma C Scheffler Mendoza 18 Marco Antonio Yamazaki-Nakashimada 18 Laura Berrón Ruiz 19 Cesar Mauricio Rojas-Maruri 20 Saul O Lugo Reyes 19 Paul A Lyons 1 2 Anthony P Williams 21 Daniel J Hodson 8 Gail A Bishop 22 23 24 Adrian J Thrasher 10 25 David C Thomas 26 Michael P Murphy 2 27 Timothy J Vyse 13 Joshua D Milner 5 Taco W Kuijpers 3 4 Kenneth G C Smith 1 2
Affiliations

Affiliations

  • 1 Cambridge Institute of Therapeutic Immunology and Infectious Disease, Jeffrey Cheah Biomedical Centre, University of Cambridge, Cambridge, UK.
  • 2 Department of Medicine, University of Cambridge School of Clinical Medicine, University of Cambridge, Cambridge, UK.
  • 3 Emma Children's Hospital, Amsterdam University Medical Center (AUMC), University of Amsterdam, Department of Pediatric Immunology, Rheumatology and Infectious Diseases, Amsterdam, Netherlands.
  • 4 Amsterdam University Medical Center (AUMC), University of Amsterdam, Department of Experimental Immunology, Amsterdam Infection and Immunity Institute, Amsterdam, Netherlands.
  • 5 Department of Pediatrics, Columbia University Irving Medical Center, New York, NY, USA.
  • 6 NIHR Cambridge BRC Cell Phenotyping Hub, Department of Medicine, University of Cambridge, Cambridge, UK.
  • 7 Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK.
  • 8 Wellcome-MRC Cambridge Stem Cell Institute, University of Cambridge, Cambridge, UK.
  • 9 Amsterdam University Center (AUMC), University of Amsterdam, Department of Pathology, Amsterdam, Netherlands.
  • 10 UCL Great Ormond Street Institute of Child Health, London, UK.
  • 11 Department of Hematology, University of Cambridge, Cambridge Biomedical Campus, Cambridge, UK.
  • 12 NIHR Bioresource-Rare Diseases, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK.
  • 13 Department of Medical and Molecular Genetics, King's College London, London, UK.
  • 14 MRC Epidemiology Unit, University of Cambridge, Cambridge, UK.
  • 15 Cambridge Centre for Lung Infection, Royal Papworth Hospital, Cambridge, UK.
  • 16 Department of Clinical Biochemistry and Immunology, Addenbrooke's Hospital, Cambridge, UK.
  • 17 Department of Infectious Diseases, Cambridge University Hospital NHS Foundation Trust, Cambridge, UK.
  • 18 Clinical Immunology Service, National Institute of Pediatrics, Secretariat of Health, Mexico City, Mexico.
  • 19 Immune Deficiencies Laboratory, National Institute of Pediatrics, Secretariat of Health, Mexico City, Mexico.
  • 20 Pathology Department, National Institute of Pediatrics, Secretariat of Health, Mexico City, Mexico.
  • 21 Wessex Investigational Sciences Hub, Faculty of Medicine, University of Southampton, Southampton, UK.
  • 22 Department of Microbiology and Immunology, University of Iowa, Iowa City, IA, USA.
  • 23 Department of Internal Medicine, University of Iowa, IA, USA.
  • 24 Veterans Affairs Medical Center, Iowa City, IA, USA.
  • 25 Great Ormond Street Hospital for Children, NHS Foundation Trust, London, UK.
  • 26 Department of Immunology and Inflammation, Center for Inflammatory Diseases, Imperial College London, London, UK.
  • 27 MRC Mitochondrial Biology Unit, University of Cambridge, Cambridge, UK.
Abstract

Tumor necrosis factor receptor-associated factor 3 (TRAF3) is a central regulator of immunity. TRAF3 is often somatically mutated in B cell malignancies, but its role in human immunity is not defined. Here, in five unrelated families, we describe an immune dysregulation syndrome of recurrent Bacterial infections, autoimmunity, systemic inflammation, B cell lymphoproliferation, and hypergammaglobulinemia. Affected individuals each had monoallelic mutations in TRAF3 that reduced TRAF3 expression. Immunophenotyping showed that patients' B cells were dysregulated, exhibiting increased nuclear factor-κB 2 activation, elevated mitochondrial respiration, and heightened inflammatory responses. Patients had mild CD4+ T cell lymphopenia, with a reduced proportion of naïve T cells but increased regulatory T cells and circulating T follicular helper cells. Guided by this clinical phenotype, targeted analyses demonstrated that common genetic variants, which also reduce TRAF3 expression, are associated with an increased risk of B cell malignancies, systemic lupus erythematosus, higher immunoglobulin levels, and Bacterial infections in the wider population. Reduced TRAF3 conveys disease risks by driving B cell hyperactivity via intrinsic activation of multiple intracellular proinflammatory pathways and increased mitochondrial respiration, with a likely contribution from dysregulated T cell help. Thus, we define monogenic TRAF3 haploinsufficiency syndrome and demonstrate how common TRAF3 variants affect a range of human diseases.

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