1. Academic Validation
  2. Small molecule modulators of TOX protein re-invigorate T cell activity

Small molecule modulators of TOX protein re-invigorate T cell activity

  • bioRxiv. 2025 Jun 18:2025.03.03.641115. doi: 10.1101/2025.03.03.641115.
Bocheng Wu 1 2 Heng Jui Chang 1 2 Prashant Singh 2 Alexander Hostetler 1 3 4 Yichen Xiang 1 3 Shenghao Guo 1 3 Fiona Yihan Wang 3 Julia J Zhong 3 Becky S Leifer 1 2 Richard P Schiavoni 1 Nan Jiang 1 2 3 Amit Choudhary 2 Peter M K Westcott 5 Angela N Koehler 1 2 3
Affiliations

Affiliations

  • 1 Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge MA 02139.
  • 2 Broad Institute of Massachusetts Institute of Technology and Harvard University, Cambridge, MA 02142.
  • 3 Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139.
  • 4 Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037.
  • 5 Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724.
Abstract

The TOX protein (thymocyte selection-associated high mobility group box) is a critical transcription factor implicated in both T acute lymphoblastic leukemia (T-ALL) and CD8+ T cell exhaustion. Gene perturbation studies suggest that inhibiting TOX may have therapeutic implications for both leukemia and T cell exhaustion. However, due to its complex molecular mechanisms and intrinsically disordered structure, TOX has not been effectively targeted by small molecules to date. In this study, we used small molecule microarray (SMM) screening and biochemical assays to identify a series of TOX protein-protein interaction (PPI) inhibitors. We identified KI-TOX-A3 as a TOX protein binder and potent TOX PPI inhibitor. In T-ALL, KI-TOX-A3 revealed selective cytotoxicity and proteosome-dependent TOX degradation. In CD8+ T cells, KI-TOX-A3 potently reversed T cell exhaustion by decreasing surface inhibitory receptors, increasing expression of effector cytokines, and enhancing Cancer cell killing activity. We also demonstrate the utility of KI-TOX-A3 to probe potential epigenetic regulatory mechanisms of TOX via KAT7 acetylation in T cells.

Keywords

DNA-binding domain; KAT7; T cell acute lymphoblastic leukemia; T cell exhaustion; TOX; cytokine; epigenetics; histone acetylation; intrinsically disordered protein; protein-protein interaction; small molecule microarray; transactivation domain; transcription factors.

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