1. Academic Validation
  2. PDGF-D-induced immunoproteasome activation and cell-cell interactions

PDGF-D-induced immunoproteasome activation and cell-cell interactions

  • Comput Struct Biotechnol J. 2023 Mar 28:21:2405-2418. doi: 10.1016/j.csbj.2023.03.047.
Jianing Zhang 1 Wanhong Li 1 Zhen Xiong 1 Juanhua Zhu 1 Xiangrong Ren 1 Shasha Wang 1 Haiqing Kuang 1 Xianchai Lin 1 Antonio Mora 2 Xuri Li 1
Affiliations

Affiliations

  • 1 State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, Guangzhou 510060, Guangdong, China.
  • 2 Joint School of Life Sciences, Guangzhou Medical University and Guangzhou Institutes of Biomedicine and Health (Chinese Academy of Sciences), Xinzao, Panyu district, Guangzhou 511436, Guangdong, China.
Abstract

Platelet-derived growth factor-D (PDGF-D) is abundantly expressed in ocular diseases. Yet, it remains unknown whether and how PDGF-D affects ocular cells or cell-cell interactions in the eye. In this study, using single-cell RNA Sequencing (scRNA-seq) and a mouse model of PDGF-D overexpression in retinal pigment epithelial (RPE) cells, we found that PDGF-D overexpression markedly upregulated the key immunoproteasome genes, leading to increased antigen processing/presentation capacity of RPE cells. Also, more than 6.5-fold ligand-receptor pairs were found in the PDGF-D overexpressing RPE-choroid tissues, suggesting markedly increased cell-cell interactions. Moreover, in the PDGF-D-overexpressing tissues, a unique cell population with a transcriptomic profile of both stromal cells and antigen-presenting RPE cells was detected, suggesting PDGF-D-induced epithelial-mesenchymal transition of RPE cells. Importantly, administration of ONX-0914, an immunoproteasome inhibitor, suppressed choroidal neovascularization (CNV) in a mouse CNV model in vivo. Together, we show that overexpression of PDGF-D increased pro-angiogenic immunoproteasome activities, and inhibiting immunoproteasome pathway may have therapeutic value for the treatment of neovascular diseases.

Keywords

Cell-cell interaction; Immune cell infiltration; Immunoproteasome; PDGF-D; Single-cell RNA sequencing.

Figures
Products