1. Academic Validation
  2. Loss of the fragile X syndrome protein FMRP results in misregulation of nonsense-mediated mRNA decay

Loss of the fragile X syndrome protein FMRP results in misregulation of nonsense-mediated mRNA decay

  • Nat Cell Biol. 2021 Jan;23(1):40-48. doi: 10.1038/s41556-020-00618-1.
Tatsuaki Kurosaki 1 2 Naoto Imamachi 3 Christoph Pröschel 4 5 Shuhei Mitsutomi 1 2 3 Rina Nagao 1 2 Nobuyoshi Akimitsu 3 Lynne E Maquat 6 7
Affiliations

Affiliations

  • 1 Department of Biochemistry and Biophysics, School of Medicine and Dentistry, University of Rochester, Rochester, NY, USA.
  • 2 Center for RNA Biology, University of Rochester, Rochester, NY, USA.
  • 3 Isotope Science Center, The University of Tokyo, Tokyo, Japan.
  • 4 Department of Biomedical Genetics, School of Medicine and Dentistry, University of Rochester, Rochester, NY, USA.
  • 5 Stem Cell and Regenerative Medicine Institute, School of Medicine and Dentistry, University of Rochester, Rochester, NY, USA.
  • 6 Department of Biochemistry and Biophysics, School of Medicine and Dentistry, University of Rochester, Rochester, NY, USA. [email protected].
  • 7 Center for RNA Biology, University of Rochester, Rochester, NY, USA. [email protected].
Abstract

Loss of the fragile X protein FMRP is a leading cause of intellectual disability and autism1,2, but the underlying mechanism remains poorly understood. We report that FMRP deficiency results in hyperactivated nonsense-mediated mRNA decay (NMD)3,4 in human SH-SY5Y neuroblastoma cells and fragile X syndrome (FXS) fibroblast-derived induced pluripotent stem cells (iPSCs). We examined the underlying mechanism and found that the key NMD factor UPF1 binds directly to FMRP, promoting FMRP binding to NMD targets. Our data indicate that FMRP acts as an NMD repressor. In the absence of FMRP, NMD targets are relieved from FMRP-mediated translational repression so that their half-lives are decreased and, for those NMD targets encoding NMD factors, increased translation produces abnormally high factor levels despite their hyperactivated NMD. Transcriptome-wide alterations caused by NMD hyperactivation have a role in the FXS phenotype. Consistent with this, small-molecule-mediated inhibition of hyperactivated NMD, which typifies iPSCs derived from patients with FXS, restores a number of neurodifferentiation markers, including those not deriving from NMD targets. Our mechanistic studies reveal that many molecular abnormalities in FMRP-deficient cells are attributable-either directly or indirectly-to misregulated NMD.

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