1. Academic Validation
  2. Optogenetic control of Protein Kinase C-epsilon activity reveals its intrinsic signaling properties with spatiotemporal resolution

Optogenetic control of Protein Kinase C-epsilon activity reveals its intrinsic signaling properties with spatiotemporal resolution

  • bioRxiv. 2025 Jan 6:2025.01.06.631444. doi: 10.1101/2025.01.06.631444.
Qunxiang Ong 1 2 3 Crystal Jing Yi Lim 1 2 Yilie Liao 1 4 Justin Tze-Yang Ng 5 Ler Ting Rachel Lim 1 Shernys Xuan Yi Koh 1 Sher En Chan 1 Pheobe Lee Yu Ying 1 Huijun Lim 1 Chen Rui Ye 1 Loo Chien Wang 6 Siok Ghee Ler 6 Radoslaw M Sobota 6 Yaw Sing Tan 5 Gerald I Shulman 7 Xiaoyong Yang 8 Weiping Han 1
Affiliations

Affiliations

  • 1 Laboratory of Metabolic Medicine, Institute of Molecular and Cell Biology, Agency for Science, Technology and Research (A*STAR), Singapore.
  • 2 These authors contributed equally.
  • 3 Lead contact.
  • 4 Duke-NUS Medical School, National University of Singapore, Singapore, Singapore.
  • 5 Bioinformatics Institute, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
  • 6 Functional Proteomics Laboratory, SingMass National Laboratory, Institute of Molecular and Cell Biology, Agency for Science, Technology and Research (A*STAR), Singapore.
  • 7 Departments of Internal Medicine and Cellular & Molecular Physiology, Yale School of Medicine, New Haven, CT 06520, Howard Hughes Medical Institute, Chevy Chase, MD.
  • 8 Departments of Comparative Medicine and Cellular & Molecular Physiology, Yale School of Medicine, New Haven, CT 06520.
Abstract

The regulation of PKC epsilon (PKCε) and its downstream effects is still not fully understood, making it challenging to develop targeted therapies or interventions. A more precise tool that enables spatiotemporal control of PKCε activity is thus required. Here, we describe a photo-activatable optogenetic PKCε probe (Opto-PKCε) consisting of an engineered PKCε catalytic domain and a blue-light inducible dimerization domain. Molecular dynamics and AlphaFold simulations enable rationalization of the dark-light activity of the optogenetic probe. We first characterize the binding partners of Opto-PKCε, which are similar to those of PKCε. Subsequent validation of the Opto-PKCε tool is performed with phosphoproteome analysis, which reveals that only PKCε substrates are phosphorylated upon light activation. Opto-PKCε could be engineered for recruitment to specific subcellular locations. Activation of Opto-PKCε in isolated hepatocytes reveals its sustained activation at the plasma membrane is required for its phosphorylation of the Insulin Receptor at Thr1160. In addition, Opto-PKCε recruitment to the mitochondria results in its lowering of the spare respiratory capacity through phosphorylation of complex I NDUFS4. These results demonstrate that Opto-PKCε may have broad applications for the studies of PKCε signaling with high specificity and spatiotemporal resolution.

Keywords

Optogenetics; Protein Kinase C-epsilon; insulin resistance; phosphoproteomics; signaling dissection; subcellular resolution.

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