1. Academic Validation
  2. Encoded cell-material interactions to reroute cytokine signaling for regenerative medicine

Encoded cell-material interactions to reroute cytokine signaling for regenerative medicine

  • bioRxiv. 2025 Oct 25:2025.10.24.684449. doi: 10.1101/2025.10.24.684449.
Zachary M Eidman 1 Jhanvi Sharma 1 Joanne C Lee 1 Nicholas F Schulze 1 Hannah J Brien 1 Kevin C Corn 2 Marjan Rafat 1 2 3 Jonathan M Brunger 1
Affiliations

Affiliations

  • 1 Department of Biomedical Engineering, Vanderbilt University, Nashville, TN.
  • 2 Department of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, TN.
  • 3 Department of Radiation Oncology, Vanderbilt University Medical Center, Nashville, TN.
Abstract

Regenerative engineering harnesses Materials science and stem Cell Biology to develop strategies to repair damaged and diseased tissue. Despite advances in designer Materials, few techniques effectively provide auto-regulated feedback mechanisms that govern how cells sense and respond to discrete microenvironmental changes. Here, we demonstrate that the artificial, juxtacrine-like receptor synthetic Notch (synNotch) can be activated by endogenous multimeric cytokines in solution, without immobilizing Materials, revealing a previously unreported activation modality and yielding up to 24-fold dynamic range. To broaden synNotch sensing to monomeric cytokines, we developed nMATRIX, a co-engineered material-cell platform that detects endogenous, soluble ligands and routes them to programmed gene circuits with spatially confined effects. nMATRIX can be tuned to recognize the interleukins IL-1β and IL-6 using synNotch receptors plus cognate biomaterials, yielding up to 68-fold dynamic range and converting these inflammatory inputs into orthogonal outputs that reprogram nearby cell phenotypes. nMATRIX functions across multiple cell types and can incorporate the synNotch-related SNIPR synthetic receptor platform. nMATRIX repurposed inflammatory signals and converted them into anti-inflammatory cues to polarize macrophages (increased CD163, CD206; decreased CD86). Thus, nMATRIX couples native soluble cues to customized cellular responses with tunable sensitivity, offering a flexible materials-based approach for self-regulating regenerative therapies.

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