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Decoding Drug Resistance in Triple-negative Breast Cancer: Mechanisms and Novel Therapeutic Strategies

Triple-negative breast cancer (TNBC) is a highly aggressive and heterogeneous subtype of breast cancer, defined by the absence of estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor 2 (HER2) expression[1]. Accounting for 15-20% of all cases, TNBC carries the poorest prognosis among breast cancer subtypes[2]. The lack of actionable therapeutic targets renders endocrine and HER2-targeted therapies largely ineffective, leaving chemotherapy, immunotherapy, and emerging targeted agents as the primary treatment options.
Drug resistance, however, remains a critical challenge. TNBC frequently develops resistance not only to conventional chemotherapy but also to novel therapies, limiting the durability of clinical response. A comprehensive understanding of the underlying mechanisms—including defects in DNA damage repair, cancer stem cell properties, epigenetic reprogramming, and immune evasion—is vital for improving treatment outcomes.
This review first summarizes current therapeutic approaches for TNBC, then examines the mechanisms driving drug resistance, and finally discusses potential strategies and innovative therapies aimed at overcoming resistance and improving patient prognosis.
Common Treatment Methods for TNBC
Drug Resistance in TNBC
Treatments
Strategies to Overcome Therapeutic Resistance in TNBC
Common Treatment Methods for TNBC
Drug Resistance in TNBC Treatments
Strategies to Overcome Therapeutic Resistance in TNBC
Common Treatment Methods for TNBC
Molecular Subtypes of TNBC
TNBC is characterized by molecular heterogeneity, which comprises distinct subtypes with diverse biological features and clinical behaviors (Table 1). Understanding these subtypes and their underlying pathogenesis is essential for guiding treatment decisions and improving patient outcomes.
Table 1. Molecular subtypes of TNBC[1].
Subtype Molecular features Clinical characteristics
Basal-like Expression of basal cytokeratins (CK5/6, CK14, CK17), TP53 mutations High histological grade, aggressive phenotype, poor prognosis
Mesenchymal (M) Upregulation of genes associated with epithelial-to-mesenchymal transition (EMT) Increased motility, invasiveness, resistance to therapy
Immunomodulatory (IM) Upregulation of immune response genes, enrichment of tumor-infiltrating lymphocytes (TILs) Better prognosis, higher response rates to immunotherapy
Luminal androgen receptor (LAR) Expression of androgen receptor (AR), luminalassociated genes Less proliferative, luminal-like features, may have better prognosis
The accurate diagnosis of TNBC is vital for informing treatment decisions and forecasting patient outcomes. However, diagnosing TNBC remains challenging due to difficulties in identifying specific biomarkers, evaluating tumor heterogeneity, and distinguishing it from other breast cancer subtypes.
Figure 1. Diagnostic challenges in triple negative breast cancer[1].
Therapeutic Strategies for TNBC
TNBC poses significant therapeutic challenges due to the absence of specific molecular targets——such as ER, PR, and HER2——that are typically targeted in other breast cancer subtypes. Consequently, TNBC management relies on a multimodal approach, which includes chemotherapy, surgery, and radiation therapy, along with emerging targeted therapies and immunotherapeutic agents (Figure 2).
Figure 2. Therapeutic strategies for TNBC[1].
• Chemotherapy
As the cornerstone of TNBC treatment across all stages, chemotherapy can shrink tumors using anthracycline (e.g., doxorubicin and epirubicin) - cyclophosphamide regimen, and can improve pathological complete response (pCR) rates by adding taxanes (e.g., paclitaxel and docetaxel) in neoadjuvant settings. Platinum agents work well for BRCA-mutated patients, while novel agents and combination regimens are under development[3].
• Surgery
Surgery aims to achieve complete tumor resection and local disease control, with options of breast-conserving surgery (lumpectomy) or mastectomy. Sentinel lymph node biopsy evaluates lymph node involvement, and some patients undergo neoadjuvant chemotherapy first to downstage tumors for breast conservation[4].
• Radiation Therapy
Radiation therapy is a key component of TNBC multidisciplinary management. Preoperative radiotherapy reduces recurrence risk and improves survival with manageable toxicity, while its combination with chemotherapy enhances pCR rates (23%-71%). Moderate hypofractionation regimens show promise but require further evaluation for long-term efficacy[5].
• Emerging Targeted Therapies
Poly (ADP-ribose) polymerase (PARP) inhibitors, such as Olaparib, Talazoparib, are FDA-approved for BRCA1/2-mutated TNBC. AR inhibitors and CDK inhibitors are effective for the LAR subtype, while PI3K/AKT/mTOR pathway inhibitors and EGFR/VEGFR tyrosine kinase inhibitors are currently under clinical trials[6].
Table 2. Emerging targeted therapies, mechanisms and clinical trials for TNBC[1].
Target Therapeutic agent Cat. No. Mechanism of action Clinical trials and results
PARP Olaparib HY-10162 Inhibits PARP enzyme, leading to DNA damage and cell death Phase III trials.
(OlympiAD, EMBRACA) demonstrated improved progression- free survival in BRCA-mutated TNBC
Talazoparib HY-16106
Niraparib HY-10619
AR Enzalutamide HY-70002 Blocks AR signaling pathway Phase II trials showed promising activity in AR-positive TNBC
Bicalutamide HY-14249
EGFR Cetuximab HY-P9905 Inhibits EGFR signaling pathway Limited efficacy in unselected TNBC patients
Geftinib HY-50895
PI3K/AKT/mTOR pathway Everolimus HY-10218 Inhibits PI3K/AKT/mTOR signaling pathway Phase II trials ongoing, with mixed results in TNBC patients
Alpelisib HY-15244
• Immunotherapy in TNBC
PD-1/PD-L1 inhibitors (e.g., Pembrolizumab) combined with chemotherapy have been FDA-approved for neoadjuvant therapy, improving survival of PD-L1-positive patients. Clinical trials such as TORCHLIGHT have demonstrated that immunotherapy plus chemotherapy prolongs progression-free survival (PFS) in advanced TNBC. Meanwhile, CAR-T therapies targeting ROR1/MUC1 and tumor vaccines are under active development[7].
Table 3. Immunotherapy in TNBC[1].
Therapeutic agent Cat. No. Mechanism of action Clinical trials and results
Pembrolizumab (anti-PD-1) HY-P9902 Blocks PD-1/PD-L1 interaction, enhances T-cell-mediated anti-tumor immune response KEYNOTE-086, KEYNOTE-119 trials demonstrated improved overall response rates and survival in PD-L1-positive TNBC
Atezolizumab (anti-PD-L1) HY-P9904 Blocks PD-L1 interaction with PD-1, enhances T-cell activation and anti-tumor immunity IMpassion130, IMpassion131 trials showed improved progression-free survival in PD-L1-positive TNBC patients
• Precision Medicine Approaches
Precision medicine formulates regimens based on tumor molecular characteristics: genomic profiling (e.g., NGS) identifies genetic alterations and potential therapeutic targets, thereby enabling targeted therapies that selectively inhibit pathogenic molecules to enhance efficacy and reduce toxicity for personalized treatment[8].
Drug Resistance in TNBC Treatments
Chemotherapy Resistance Mechanisms
Chemotherapy remains a first-line treatment for TNBC in current clinical practice, with taxanes and anthracyclines as standard regimens. Platinum-based therapies have also shown efficacy in metastatic TNBC. However, most patients eventually develop chemotherapy resistance during treatment, reducing efficacy and contributing to TNBC’s higher recurrence rate compared with other breast cancer subtypes[9].
Chemotherapy resistance arises from intrinsic, acquired, and overlapping mechanisms. Intrinsic factors include ABC transporters (e.g., ABCG2, ABCC1, ABCB1) that reduce intracellular drug accumulation, tumor heterogeneity, anti-apoptotic signaling (e.g., BCL-2 upregulation, p53 loss), and metabolic reprogramming (e.g., glycolysis, fatty acid oxidation). Overlapping factors involve BCSC self-renewal and aberrant signaling (e.g., NF-κB, PI3K/AKT/mTOR), while acquired mechanisms such as hypoxia (e.g., limiting doxorubicin uptake and stabilizing HIF-1α) and the tumor microenvironment (e.g., CAFs and inflammatory cytokines promoting metastasis and immune suppression) further exacerbate resistance (Figure 3)[10].
Figure 3. Mechanisms of chemotherapy resistance in TNBC[10].
Immunotherapy Resistance Mechanisms
Elucidation of tumors’ intrinsic immune evasion mechanisms has enhanced understanding of immunotherapy responses in breast cancer. TNBC exhibits higher immunotherapeutic potential due to its elevated tumor mutational burden and abundant lymphocyte infiltration, with immune checkpoint inhibitors (ICIs) representing the first clinically successful immunotherapy. However, some patients have poor responses and develop acquired resistance[11].
Similar to chemotherapy, TNBC also develops resistance to immunotherapy via multiple mechanisms. Intrinsic mechanisms include altered TMB and epigenetic modifications that shape tumor growth and the immune microenvironment. Intrinsic/acquired factors such as loss antigen presentation (e.g., MAL2-mediated reduction) and aberrant signaling pathways (e.g., Ras-MAPK/IFN-γ, PTEN-PI3K/Akt) impair immune recognition and T-cell infiltration. Acquired resistance involves dysfunctional immune cells, including exhausted T cells, impaired NK cell activity, and immunosuppressive populations like TAMs and MDSCs, all contributing to immune evasion and reduced response to checkpoint inhibitors (Figure 4)[10].
Figure 4. Drug resistance in immunotherapy for TNBC[10].
Strategies to Overcome Therapeutic Resistance in TNBC
TNBC refractoriness primarily arises from its complex biological characteristics, including both primary and acquired resistance to multiple chemotherapeutic drugs. This resistance not only limits therapeutic efficacy but also significantly compromises patients’ quality of life and overall survival. Researchers are actively developing novel therapeutic strategies to overcome these resistance mechanisms (Figure 5)[10].
Novel Immunotherapies
Chemotherapy resistance in TNBC often increases with prolonged treatment. ICIs have partially addressed this challenge but cannot overcome all chemoresistance mechanisms, and some patients eventually develop immunotherapy resistance. Extensive studies have elucidated the main mechanisms of resistance, providing a foundation for the development of novel immunotherapies targeting TNBC (Table 4).
• Combination of ICIs with Other Therapies
ICIs remain the core of TNBC immunotherapy. Researchers are exploring their combination with chemotherapy, radiotherapy, etc., to reduce resistance and improve efficacy through multi-biological synergy. For example, pembrolizumab combined with chemotherapy prolongs median progression-free survival in advanced TNBC. When combined with radiotherapy, it achieves a higher overall response rate. Oncolytic viruses have also been shown to enhance ICI efficacy.
• Tumor Vaccines
Reduced tumor immunogenicity in TNBC contributes to immunotherapy resistance. Tumor vaccines enhance immunogenicity and activate the immune system by introducing tumor antigens, thereby improving therapeutic efficacy. For example, ASPH-targeted nano-vaccines enhance doxorubicin efficacy, and neoantigen DNA vaccines have achieved an 87.5% recurrence-free survival rate in early studies. Most vaccines are currently in early clinical stages.
• Cellular Immunotherapy
ICI-resistant TNBC often involves TIL-mediated resistance. Cellular immunotherapy involves ex vivo activation of immune cells, such as NK cells or CAR-T cells, followed by infusion to target tumor cells. This approach is often combined with chemotherapy to enhance efficacy. For example, cytokine-induced killer (CIK) cells combined with cetuximab have been shown to inhibit tumor growth.
• Bispecific Antibody Therapy (BsAb)
TNBC is highly heterogeneous. Bispecific antibodies simultaneously engage immune cells and tumor antigens to enhance cytotoxicity. For example, TROP2/CD3-targeted BsAb have demonstrated activity against TNBC, and multiple BsAbs are currently under clinical investigation.
• Antibody-Drug Conjugates (ADCs)
ADCs deliver cytotoxic drugs directly to tumor cells with high precision. The FDA has approved three ADCs for breast cancer: T-DM1, T-DXd (HER2-targeted), and sacituzumab govetican (Trop-2-targeted), the latter achieving a 33.3% response rate in metastatic TNBC with manageable side effects.
Table 4. Strategies to overcome therapeutic resistance in TNBC[10].
Therapeutic type Therapeutic regimen Specific drugs Cat. No.
Novel immunotherapies Combination of ICIs and other treatments Pembrolizumab combined with Paclitaxel HY-P9902
HY-B0015
Tumor vaccine The MUC1 peptide vaccine /
Cellular immunotherapy Combination therapy with haNK + N-803 HY-P991077
BsAb KN046 HY-P99943
ADCs Sacituzumab govetican HY-132254
Molecular targeted therapies PARP Inhibitors Niraparib HY-10619
CDK inhibitors Abemaciclib HY-16297A
PI3K/AKT/mTOR pathway inhibitors Buparlisib HY-70063
EGFR inhibitors Cetuximab + Cisplatin HY-P9905
HY-17394
VEGFR inhibitors Emodin HY-14393
Notch inhibitors RO4929097 HY-11102
Epigenetic modifications Niclosamide HY-B0497
Targeting regulated cell death ENMD-2076 HY-10987A
Drug delivery systems Nab-Paclitaxel + Bevacizumab HY-P9906
Other novel therapies Photodynamic therapy I2BC-Pt /
Ferroptosis Chemotherapeutics delivered with Ferrocene and GPX4 inhibitor RSL3 HY-100218A
Fasting-mimicking diets Fasting-mimicking diet + Carboplatin-based chemotherapy HY-17393
Oncolytic virotherapy Oncolytic T-VEC virotherapy + neoadjuvant chemotherapy /
Molecular Targeted Therapies
Some patients develop resistance to ICIs. TNBC resistance is often associated with gene mutations, aberrant signaling pathways, etc. Multi-omics analyses facilitate the identification of therapeutic targets, enabling the development of targeted therapies against specific molecules or pathways with reduced side effects (Table 4).
• Targeted Inhibitors
Inhibitors targeting abnormal molecules or signaling pathways in TNBC enable precise treatment and reduce resistance. Major classes include:
PARP inhibitors: Leveraging BRCA mutations. For example, talazoparib combined with radiotherapy enhances tumor senescence.
CDK inhibitors: CDK4/6 inhibitors arrest the cell cycle, while CDK7 inhibitors show efficacy against TNBC.
Other pathway inhibitors: Targeting PI3K/AKT/mTOR, EGFR, VEGFR, TGF-β, Notch and STAT3 pathways demonstrates anti-tumor activity.
• Epigenetic Modifications
Epigenetic modifications regulate gene expression and can mitigate therapeutic resistance. For example, LSD1 inhibitor-loaded hydrogels have been shown to restore chemosensitivity and stimulate anti-tumor immunity in TNBC.
• Targeting Regulated Cell Death (RCD)
Evasion of apoptosis contributes to TNBC resistance. Small molecules targeting regulated cell death (RCD), such as ENMD-2076, can effectively induce cancer cell death.
• Drug Delivery Systems
Nanocarrier-based drug delivery systems, including SLR-LNPs and Pos3Aa-p53 crystals, enhance tumor-targeted drug delivery and improve therapeutic efficacy.
Other Novel Therapies
Multiple novel therapeutic strategies have demonstrated significant potential in overcoming TNBC resistance, including the following categories:
• Photodynamic Therapy (PDT)
Photodynamic therapy (PDT) relies on photosensitizers, specific wavelengths of light, and oxygen to generate reactive oxygen species through photochemical reactions, directly killing tumor cells. PDT also disrupts tumor vasculature and activates immune responses. Studies have shown that combining PDT with OXPHOS inhibitor Rubioncolin C (RC) effectively alleviates tumor hypoxia and significantly enhances anti-TNBC efficacy.
• Ferroptosis-Inducing Therapy
Ferroptosis-inducing therapy triggers iron-dependent, non-apoptotic cell death through lipid peroxidation, thereby bypassing resistance associated with traditional apoptotic pathways. Nano-prodrug systems loaded with chemotherapeutics, ferrocene and GPX4 inhibitors, or simvastatin-encapsulated magnetic nanoparticles efficiently induce ferroptosis in TNBC cells.
• Fasting-Mimicking Diet (FMD)
Fasting-mimicking diet (FMD) regulates cellular stress responses, enhancing the stress resistance of healthy cells while increasing therapeutic sensitivity of cancer cells. This approach improves immunotherapy efficacy and reduces the population of breast cancer stem cells (BCSCs). Additionally, FMD can inhibit NRAS/IGF1-mediated mTORC1 signaling, thereby reversing acquired resistance of TNBC to CDK4/6 inhibitors.
• Oncolytic Virotherapy
Oncolytic virotherapy exploits viruses’ ability to selectively infect and kill tumor cells. Mumps virus strains MuV-UA/UC have shown efficacy against chemo-resistant TNBC cell lines. Recombinant measles virus rMV-SLAMblind targeting Nectin-4 can inhibit tumor growth without observable toxicity following intravenous administration.
Figure 5. Strategies targeting drug resistance in TNBC treatment[10].
Summary
TNBC remains a major therapeutic challenge due to its molecular heterogeneity and complex resistance mechanisms. Small-molecule inhibitors, characterized by precise targeting, structural flexibility, and combinatorial potential, are emerging as important tools to overcome TNBC resistance. By modulating signaling pathways such as PI3K/AKT/mTOR, Notch, and STAT3, as well as epigenetic regulation, these agents can reverse resistance and enhance treatment sensitivity. The integration of multi-omics data with AI-driven drug discovery is expected to accelerate the development of novel inhibitors, providing more precise and effective options for TNBC.
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