GRHL2 - grainyhead like transcription factor 2 Gene
Also Known as BOM; ECTDS; PPCD4; DFNA28; TFCP2L3
Species: Homo sapiens
About GRHL2
This gene has 6 transcripts (splice variants), 276 orthologues, 5 paralogues and is associated with 8 phenotypes. Broad expression in skin (RPKM 14.0), prostate (RPKM 13.5) and 14 other tissues.
Summary
The protein encoded by this gene is a transcription factor that can act as a homodimer or as a heterodimer with either GRHL1 or GRHL3. Defects in this gene are a cause of non-syndromic sensorineural deafness autosomal dominant type 28 (DFNA28).[provided by RefSeq, Mar 2009]
GRHL2 Products (2)
| mRNA | Protein | Name |
|---|---|---|
| NM_001330593.2 | NP_001317522.1 | grainyhead-like protein 2 homolog isoform 2 |
| NM_024915.4 | NP_079191.2 | grainyhead-like protein 2 homolog isoform 1 |
| Molecular Function GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| enables DNA-binding transcription activator activity |
IDA
IDA: Inferred from direct assay
|
20938050 | GOA |
| enables DNA-binding transcription activator activity, RNA polymerase II-specific |
IDA
IDA: Inferred from direct assay
|
23814079 | GOA |
| enables DNA-binding transcription activator activity, RNA polymerase II-specific |
IMP
IMP: Inferred from mutant phenotype
|
29309642 | GOA |
| enables DNA-binding transcription factor activity |
IDA
IDA: Inferred from direct assay
|
23254293 | GOA |
| enables DNA-binding transcription factor binding |
IPI
IPI: Inferred from physical interaction
|
35013237 | GOA |
| enables chromatin DNA binding |
IDA
IDA: Inferred from direct assay
|
21081122 | GOA |
| enables identical protein binding |
IPI
IPI: Inferred from physical interaction
|
12175488 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
12175488 | GOA |
| enables sequence-specific DNA binding |
IDA
IDA: Inferred from direct assay
|
19015635 | GOA |
| Biological Process GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| involved in bicellular tight junction assembly |
IMP
IMP: Inferred from mutant phenotype
|
25152456 | GOA |
| involved in cell adhesion |
IMP
IMP: Inferred from mutant phenotype
|
25152456 | GOA |
| involved in cell junction assembly |
IMP
IMP: Inferred from mutant phenotype
|
25152456 | GOA |
| involved in epithelial cell morphogenesis |
IMP
IMP: Inferred from mutant phenotype
|
25152456 | GOA |
| involved in keratinocyte differentiation |
IDA
IDA: Inferred from direct assay
|
23254293 | GOA |
| involved in positive regulation of transcription by RNA polymerase II |
IDA
IDA: Inferred from direct assay
|
23814079 | GOA |
| involved in positive regulation of transcription by RNA polymerase II |
IMP
IMP: Inferred from mutant phenotype
|
29309642 | GOA |
| involved in regulation of transcription by RNA polymerase II |
IDA
IDA: Inferred from direct assay
|
23254293 | GOA |
| Cellular Component GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| located in cell-cell junction |
IDA
IDA: Inferred from direct assay
|
25152456 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
20938050 | GOA |
GRHL2 Protein Structure
CP2: CP2 transcription factor (219 - 438)
- 0
- 100
- 200
- 300
- 400
- 500
- 625 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
grainyhead-like protein 2 homolog |
|
GRHL2 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | Verweise |
|---|---|---|---|---|---|---|---|
|
Intra
|
GRHL2 | Q6ISB3 | GRHL1 | Homo sapiens | Q9NZI5 | 28514442 | |
|
Intra
|
GRHL2 | Q6ISB3 | GRHL2 | Homo sapiens | Q6ISB3 | 12175488 | |
|
Intra
|
GRHL2 | Q6ISB3 | LMO4 | Homo sapiens | P61968 | 25416956 | |
|
Intra
|
GRHL2 | Q6ISB3 | PIAS2 | Homo sapiens | O75928-2 | 32296183 | |
|
Intra
|
GRHL2 | Q6ISB3 | LMO4 | Homo sapiens | P61968 | 25416956 | |
|
Intra
|
GRHL2 | Q6ISB3 | PAX5 | Homo sapiens | Q02548 | 32296183 | |
|
Intra
|
GRHL2 | Q6ISB3 | PAX6 | Homo sapiens | P26367 | 32296183 | |
|
Intra
|
GRHL2 | Q6ISB3 | GRHL2 | Homo sapiens | Q6ISB3 | 12175488 | |
|
Intra
|
GRHL2 | Q6ISB3 | PAX5 | Homo sapiens | Q02548 | 32296183 | |
|
Intra
|
GRHL2 | Q6ISB3 | GRHL1 | Homo sapiens | Q9NZI5 | 33961781 | |
|
Intra
|
GRHL2 | Q6ISB3 | PAX6 | Homo sapiens | P26367 | 32296183 | |
|
Intra
|
GRHL2 | Q6ISB3 | LMO4 | Homo sapiens | P61968 | 25416956 | |
|
Intra
|
GRHL2 | Q6ISB3 | PIAS2 | Homo sapiens | O75928-2 | 32296183 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Ectodermal Dysplasia/Short Stature Syndrome |
|
|
| Corneal Dystrophy, Posterior Polymorphous, 4 |
|
|
| Deafness, Autosomal Dominant 28 |
|
|
| Corneal Dystrophy, Posterior Polymorphous, 1 |
|
|
| Autosomal Dominant Non-Syndromic Sensorineural Deafness Type Dfna |
|
|
| Corneal Dystrophy |
|
|
| Posterior Corneal Dystrophy |
|
|
| Corneal Edema |
|
|
| Ectodermal Dysplasia |
|
|
| Deafness, Autosomal Dominant 18 |
|
|
| Sensorineural Hearing Loss |
|
|
| Corneal Dystrophy, Posterior Polymorphous, 3 |
|
|
| Ectodermal Dysplasia 9, Hair/Nail Type |
|
|
| Gastric Squamous Cell Carcinoma |
|
|
| Deafness, Autosomal Dominant 10 |
|
|
| Van Der Woude Syndrome |
|
|
| Ectodermal Dysplasia 4, Hair/Nail Type |
|
|
| Dyskeratosis Congenita |
|
|
| Autosomal Dominant Nonsyndromic Deafness |
|
|
| Neural Tube Defects |
|
|
| Cleft Palate, Isolated |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Rattus norvegicus | GRHL2 | RGD | RGD:1561191 |
| Felis catus | GRHL2 | VGNC | VGNC:62710 |
| Canis familiaris | GRHL2 | VGNC | VGNC:41477 |
| Macaca mulatta | GRHL2 | VGNC | VGNC:73248 |
| Bos taurus | GRHL2 | VGNC | VGNC:29635 |
| Mus musculus | GRHL2 | MGD | MGI:2182543 |
| Others | GRHL2 | NCBI |