PTCD3 - pentatricopeptide repeat domain 3 Gene
Also Known as COXPD51; MRP-S39
生物種: Homo sapiens
About PTCD3
This gene has 20 transcripts (splice variants), 204 orthologues and is associated with 1 phenotype. Ubiquitous expression in testis (RPKM 14.7), heart (RPKM 11.3) and 25 other tissues.
Summary
Enables rRNA binding activity and ribosomal small subunit binding activity. Involved in mitochondrial translation. Located in several cellular components, including cytosol; mitochondrion; and nucleoplasm. Implicated in combined Oxidative Phosphorylation deficiency 51. [provided by Alliance of Genome Resources, Apr 2022]
PTCD3 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_017952.6 | NP_060422.4 | pentatricopeptide repeat domain-containing protein 3, mitochondrial precursor |
| Molecular Function GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
19427859 | GOA |
| enables rRNA binding |
IDA
IDA: Inferred from direct assay
|
19427859 | GOA |
| enables ribosomal small subunit binding |
IDA
IDA: Inferred from direct assay
|
19427859 | GOA |
| Biological Process GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| involved in mitochondrial translation |
IMP
IMP: Inferred from mutant phenotype
|
19427859 | GOA |
| Cellular Component GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| located in mitochondrion |
IDA
IDA: Inferred from direct assay
|
19427859 | GOA |
PTCD3 Protein Structure
PPR_2: PPR repeat family (254 - 300)
PPR_3: Pentatricopeptide repeat domain (333 - 367)
- 0
- 200
- 400
- 600
- 689 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
pentatricopeptide repeat domain-containing protein 3, mitochondrial |
|
PTCD3 Protein-protein interaction Information
|
Type
|
タンパク質名 | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | 参考文献 |
|---|---|---|---|---|---|---|---|
|
Intra
|
PTCD3 | Q96EY7 | LNX2 | Homo sapiens | Q8N448 | 29892012 | |
|
Intra
|
PTCD3 | Q96EY7 | LNX2 | Homo sapiens | Q8N448 | 31515488 |
関連疾患
| Diseases | Alias | |
|---|---|---|
| Combined Oxidative Phosphorylation Deficiency 51 |
|
|
| Combined Oxidative Phosphorylation Deficiency |
|
|
| Leigh Syndrome |
|
|
| Mitochondrial Complex I Deficiency, Nuclear Type 1 |
|
|
Orthologs Information
| 生物種 | Symbol | 由来 | ID |
|---|---|---|---|
| Rattus norvegicus | PTCD3 | RGD | RGD:1565582 |
| Macaca mulatta | PTCD3 | VGNC | VGNC:76309 |
| Felis catus | PTCD3 | VGNC | VGNC:64423 |
| Canis familiaris | PTCD3 | VGNC | VGNC:45132 |
| Mus musculus | PTCD3 | MGD | MGI:1917206 |
| Bos taurus | PTCD3 | VGNC | VGNC:33491 |
| Others | PTCD3 | NCBI |