BAY-8400: A Novel Potent and Selective DNA-PK Inhibitor which Shows Synergistic Efficacy in Combination with Targeted Alpha Therapies

  • J Med Chem. 2021 Sep 9;64(17):12723-12737. doi: 10.1021/acs.jmedchem.1c00762.
Markus Berger  1 ,  Lars Wortmann  1 ,  Philipp Buchgraber  1 ,  Ulrich Lücking  1 ,  Sabine Zitzmann-Kolbe  1 ,  Antje M Wengner  1 ,  Benjamin Bader  1 ,  Ulf Bömer  1 ,  Hans Briem  1 ,  Knut Eis  1 ,  Hartmut Rehwinkel  1 ,  Florian Bartels  1 ,  Dieter Moosmayer  1 ,  Uwe Eberspächer  1 ,  Philip Lienau  1 ,  Stefanie Hammer  1 ,  Christoph A Schatz  1 ,  Qiuwen Wang  2 ,  Qi Wang  3 ,  Dominik Mumberg  1 ,  Carl F Nising  1 ,  Gerhard Siemeister  1
Affiliations
  • 1. Research & Development, Pharmaceuticals, Bayer AG, Berlin 13353, Germany.
  • 2. Pharmaron Beijing Co., Ltd., 6 Taihe Road, BDA, Beijing 100176, P. R. China.
  • 3. WuXi AppTec (Wuhan) Co., Ltd., 666 Gaoxin Road, East Lake High-tech Development Zone, Wuhan 430075, P. R. China.
Abstract

Eukaryotes have evolved two major pathways to repair potentially lethal DNA double-strand breaks. Homologous recombination represents a precise, DNA-template-based mechanism available during the S and G2 cell cycle phase, whereas non-homologous end joining, which requires DNA-dependent protein kinase (DNA-PK), allows for fast, cell cycle-independent but less accurate DNA repair. Here, we report the discovery of BAY-8400, a novel selective inhibitor of DNA-PK. Starting from a triazoloquinoxaline, which had been identified as a hit from a screen for ataxia telangiectasia and Rad3-related protein (ATR) inhibitors with inhibitory activity against ATR, ATM, and DNA-PK, lead optimization efforts focusing on potency and selectivity led to the discovery of BAY-8400. In in vitro studies, BAY-8400 showed synergistic activity of DNA-PK inhibition with DNA damage-inducing targeted Alpha therapy. Combination of PSMA-targeted thorium-227 conjugate BAY 2315497 treatment of human prostate tumor-bearing mice with BAY-8400 oral treatment increased antitumor efficacy, as compared to PSMA-targeted thorium-227 conjugate monotherapy.

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