BODIPY FL-EDA
Based on 1 Customer Validation
BODIPY FL-EDA is a widely used fluorescent dye for quantitative analysis of nucleotides. BODIPY FL-EDA is an aliphatic amine analog that can react with aldehydes and ketones. BODIPY FL-EDA can be used to detect both modified and unmodified deoxynucleotides and to determine DNA damage and genomic DNA methylation through capillary electrophoresis with laser-induced fluorescence (CE-LIF). Additionally, it can be used for quantifying intracellular ATP levels. The excitation wavelength is 500 nm, and the emission wavelength is 510 nm.
For research use only. We do not sell to patients.
- Purity: 97.86%
- CAS No.: 209541-26-4
- Formula: C16H22BClF2N4O
- Molecular Weight:370.63
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Storage:
-20°C, sealed storage, away from moisture and light
* In solvent : -80°C, 6 months; -20°C, 1 month (sealed storage, away from moisture and light)
Biological Activity
Guidelines (Following is our recommended protocol. This protocol only provides a guideline, and should be modified according to your specific needs).
1.1 Preparation of Stock Solution
Prepare a 22 mmol/L BODIPY FL-EDA solution in DMSO.
Note: It is recommended to aliquot the BODIPY FL-EDA stock solution and store it protected from light at -20°C or -80°C.
2 Quantitative Detection of ATP in Sperm and Oocytes Using BODIPY FL-EDA Labeling
2.1 Sample Derivatization: Mix 10 μL of lysed sperm or oocyte samples with 40 μL of 1.4 M EDC (dissolved in HEPES (HY-D0857), pH 7.5) and 5 μL of the 22 mM BODIPY FL-EDA stock solution. Incubate the mixture in the dark at 25°C for 24 hours.
2.2 Perform quantitative detection of ATP using capillary electrophoresis with laser-induced fluorescence detection (CE-LIF)
(1) CE Separation: Dilute the derivatized sample 40 times with water before injecting it into the capillary electrophoresis instrument. Under the influence of a high-voltage electric field, BODIPY-ATP will migrate in the capillary based on its charge-to-mass ratio.
(2) LIF Detection: At the capillary outlet, use a laser to excite the fluorescence of BODIPY-ATP. The excitation wavelength is 500 nm, and the emission wavelength is 510 nm. The emitted fluorescence is detected by a photomultiplier tube and converted into an electrical signal.
(3) Standard Curve Preparation: Perform CE-LIF analysis using a series of ATP standards with known concentrations to generate a standard curve correlating fluorescence intensity with ATP concentration.
(4) Data Analysis: Calculate the ATP concentration in the samples based on the fluorescence intensity using the standard curve.
MedChemExpress (MCE) has not independently confirmed the accuracy of these methods. They are for reference only.
510
502
Chemical Information
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CAS No. 209541-26-4
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Appearance Solid
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Molecular Weight 370.63
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Formula C16H22BClF2N4O
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Color Orange to red
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SMILES
[F-][B+3]1([N-]2C(C=C(C(C)=C3)[N]1=C3C)=CC=C2CCC(NCCN)=O)[F-].Cl
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Shipping
Room temperature in continental US; may vary elsewhere.
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Storage
-20°C, sealed storage, away from moisture and light
* In solvent : -80°C, 6 months; -20°C, 1 month (sealed storage, away from moisture and light)
Solvent & Solubility
DMSO : 100 mg/mL (269.81 mM; Need ultrasonic; Hygroscopic DMSO has a significant impact on the solubility of product, please use newly opened DMSO)
Please refer to the solubility information to select the appropriate solvent. Once prepared, please aliquot and store the solution to prevent product inactivation from repeated freeze-thaw cycles.
Storage method and period of stock solution: -80°C, 6 months; -20°C, 1 month (sealed storage, away from moisture and light). When stored at -80°C, please use it within 6 months. When stored at -20°C, please use it within 1 month.
Please refer to the solubility information to select the appropriate solvent. Once prepared, please aliquot and store the solution to prevent product inactivation from repeated freeze-thaw cycles.
Storage method and period of stock solution: -80°C, 6 months; -20°C, 1 month (sealed storage, away from moisture and light). When stored at -80°C, please use it within 6 months. When stored at -20°C, please use it within 1 month.
Concentration (start) × Volume (start) = Concentration (final) × Volume (final)
Purity & Documentation
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Data Sheet (275 KB)
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SDS (252 KB)
- English - EN (252 KB)
- Français - FR (252 KB)
- Deutsch - DE (252 KB)
- Norwegian - NO (252 KB)
- Español - ES (252 KB)
- Swedish - SV (252 KB)
- Italian - IT (252 KB)
- Korean - KR (252 KB)
- Portuguese - PT (252 KB)
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Handling Instructions (2659 KB)
References
[1]. Cornelius M, et al. Detection and separation of nucleoside-5'-monophosphates of DNA by conjugation with the fluorescent dye BODIPY and capillary electrophoresis with laser-induced fluorescence detection. Electrophoresis. 2005 Jun;26(13):2591-8. [Content Brief]
[2]. Zinellu A, et al. Capillary electrophoresis with laser-induced fluorescence detection for ATP quantification in spermatozoa and oocytes. Anal Bioanal Chem. 2010 Nov;398(5):2109-16. [Content Brief]
[3]. Cornelius MG, et al. RNA analysis by MEKC with LIF detection. Electrophoresis. 2007 Nov;28(21):3901-7. [Content Brief]
Complete Stock Solution Preparation Table
Please refer to the solubility information to select the appropriate solvent. Once prepared, please aliquot and store the solution to prevent product inactivation from repeated freeze-thaw cycles.
Storage method and period of stock solution: -80°C, 6 months; -20°C, 1 month (sealed storage, away from moisture and light). When stored at -80°C, please use it within 6 months. When stored at -20°C, please use it within 1 month.
| Optional Solvent | Concentration Solvent Mass | 1 mg | 5 mg | 10 mg | 25 mg |
|---|---|---|---|---|---|
| DMSO | 1 mM | 2.6981 mL | 13.4905 mL | 26.9811 mL | 67.4527 mL |
| 5 mM | 0.5396 mL | 2.6981 mL | 5.3962 mL | 13.4905 mL | |
| 10 mM | 0.2698 mL | 1.3491 mL | 2.6981 mL | 6.7453 mL | |
| 15 mM | 0.1799 mL | 0.8994 mL | 1.7987 mL | 4.4968 mL | |
| 20 mM | 0.1349 mL | 0.6745 mL | 1.3491 mL | 3.3726 mL | |
| 25 mM | 0.1079 mL | 0.5396 mL | 1.0792 mL | 2.6981 mL | |
| 30 mM | 0.0899 mL | 0.4497 mL | 0.8994 mL | 2.2484 mL | |
| 40 mM | 0.0675 mL | 0.3373 mL | 0.6745 mL | 1.6863 mL | |
| 50 mM | 0.0540 mL | 0.2698 mL | 0.5396 mL | 1.3491 mL | |
| 60 mM | 0.0450 mL | 0.2248 mL | 0.4497 mL | 1.1242 mL | |
| 80 mM | 0.0337 mL | 0.1686 mL | 0.3373 mL | 0.8432 mL | |
| 100 mM | 0.0270 mL | 0.1349 mL | 0.2698 mL | 0.6745 mL |