EMG1 - EMG1 N1-specific pseudouridine methyltransferase Gene

Also Known as C2F; NEP1; Grcc2f

Species: Homo sapiens

Gene Type: protein coding
Gene ID: 10436

About EMG1

Cytogenetic location: 12p13.31 Genomic coordinates (GRCh38): 12:6,970,913-6,997,428 (from NCBI)

This gene has 4 transcripts (splice variants), 212 orthologues and is associated with 3 phenotypes. Ubiquitous expression in appendix (RPKM 11.6), lymph node (RPKM 11.5) and 25 other tissues.

Summary

This gene encodes an essential, conserved eukaryotic protein that methylates pseudouridine in 18S rRNA. The related protein in yeast is a component of the small subunit processome and is essential for biogenesis of the ribosomal 40S subunit. A mutation in this gene has been associated with Bowen-Conradi syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2016]

EMG1 Products (2)

mRNA Protein Name
NM_001320049.2 NP_001306978.1 ribosomal RNA small subunit methyltransferase NEP1 isoform 2
NM_006331.8 NP_006322.4 ribosomal RNA small subunit methyltransferase NEP1 isoform 1
Molecular Function GO Annotation Evidence Verweise Source
enables identical protein binding IPI
IPI: Inferred from physical interaction
32296183 GOA
enables protein binding IPI
IPI: Inferred from physical interaction
32296183 GOA
enables rRNA (pseudouridine) methyltransferase activity IDA
IDA: Inferred from direct assay
20047967 GOA
Biological Process GO Annotation Evidence Verweise Source
involved in ribosomal small subunit biogenesis IDA
IDA: Inferred from direct assay
34516797 GOA
Cellular Component GO Annotation Evidence Verweise Source
part of small-subunit processome IDA
IDA: Inferred from direct assay
34516797 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern
Protein Preferred Names Protein Names

ribosomal RNA small subunit methyltransferase NEP1

  • 18S rRNA (pseudouridine(1248)-N1)-methyltransferase

EMG1 Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method Verweise
Intra
EMG1 Q92979 FAM74A4 Homo sapiens Q5TZK3 25416956
Intra
EMG1 Q92979 FAM74A4 Homo sapiens Q5TZK3 25416956
Intra
EMG1 Q92979 ZNF768 Homo sapiens Q9H5H4 32296183
Intra
EMG1 Q92979 ZNF768 Homo sapiens Q9H5H4 32296183
Intra
EMG1 Q92979 ZNF768 Homo sapiens Q9H5H4 32296183
Intra
EMG1 Q92979 HSD3B7 Homo sapiens Q9H2F3 32296183
Intra
EMG1 Q92979 EMG1 Homo sapiens Q92979 32296183
Intra
EMG1 Q92979 CTSE Homo sapiens P14091 16169070
Intra
EMG1 Q92979 EMG1 Homo sapiens Q92979 32296183
Intra
EMG1 Q92979 PSMB7 Homo sapiens Q99436 16169070
Intra
EMG1 Q92979 HIVEP1 Homo sapiens P15822 16169070
Intra
EMG1 Q92979 KHDRBS1 Homo sapiens Q07666 16169070
Intra
EMG1 Q92979 ANXA3 Homo sapiens P12429 16169070
Intra
EMG1 Q92979 PSME1 Homo sapiens Q06323 16169070
Intra
EMG1 Q92979 SLC25A38 Homo sapiens Q96DW6 16169070
Intra
EMG1 Q92979 EMG1 Homo sapiens Q92979 32296183
Intra
EMG1 Q92979 NAA80 Homo sapiens Q93015 16169070
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases Alias
Bowen-Conradi Syndrome
  • BWCNS

  • Bowen Hutterite Syndrome

  • Bowen-Conradi Hutterite Syndrome

  • Bowen Syndrome, Hutterite Type

  • Bowen Hutterite Syndrome, Formerly

  • Hutterite Syndrome

  • Bowen Syndrome Hutterite Type

  • Fetal Growth Retardation

Deafness, Autosomal Recessive 9
  • Auditory Neuropathy, Autosomal Recessive, 1

  • Neurosensory Nonsyndromic Recessive Deafness 9

  • DFNB9

  • Nsrd9

  • Autosomal Recessive Nonsyndromic Deafness 9

  • Autosomal Recessive Deafness 9

  • Nrsd9

  • AUNB1

  • Nonsyndromic Auditory Neuropathy Autosomal Recessive

  • Nsran

  • Deafness, Autosomal Recessive, 9

  • Deafness Neurosensory Autosomal Recessive 9

  • Non-Syndromic Neurosensory Deafness Autosomal Recessive Type 9

  • Non-Syndromic Recessive Hearing Loss 9

  • Deafness, Autosomal Recessive, Type 9

  • Auditory Neuropathy, Nonsyndromic Recessive

Alopecia, Neurologic Defects, And Endocrinopathy Syndrome
  • Ane Syndrome

  • ANES

  • Alopecia-Progressive Neurological Defect-Endocrinopathy Syndrome

  • Alopecia-Progressive Neurological Defect-Endocrinopathy

  • Endocrine System Diseases

Atypical Polypoid Adenomyoma
Anauxetic Dysplasia 1
  • Anauxetic Dysplasia

  • Spondylometaepiphyseal Dysplasia, Menger Type

  • Spondylometaepiphyseal Dysplasia, Anauxetic Type

  • Spondyloepimetaphyseal Dysplasia, Anauxetic Type

  • ANXD1

  • Anxd

  • Spondylometaepiphyseal Dysplasia Anauxetic Type

  • Spondylometaepiphyseal Dysplasia Menger Type

  • Ad

  • Spondyloepimetaphyseal Dysplasia, Menger Type

  • Dysplasia, Anauxetic, Type 1

Shwachman-Diamond Syndrome 1
  • Shwachman-Diamond Syndrome

  • Shwachman Syndrome

  • Shwachman-Bodian-Diamond Syndrome

  • Sds

  • Pancreatic Insufficiency And Bone Marrow Dysfunction

  • Shwachman-Bodian Syndrome

  • SDS1

  • Lipomatosis Of Pancreas, Congenital

  • Congenital Lipomatosis Of Pancreas

  • Shwachman-Diamond Type Metaphyseal Dysplasia

  • Metaphyseal Chondrodysplasia, Shwachman Type

  • Shwachman-Diamond-Oski Syndrome

Autosomal Recessive Nonsyndromic Deafness
  • Deafness, Autosomal Recessive, Nonsyndromic

Microcephaly
  • Microencephaly

  • Microcephalus

  • Microcephalic

  • Nanocephaly

  • Congenital Microcephaly

  • Brain Hypoplasia

  • Brain Nondevelopment

  • Cephalic Hypoplasia

  • Undeveloped Cerebrum

  • Undeveloped Brain

  • Micrencephalon

  • Micrencephaly

Diamond-Blackfan Anemia
  • Congenital Pure Red Cell Aplasia

  • Aase Syndrome

  • Erythrogenesis Imperfecta

  • Anemia, Diamond-Blackfan

  • Congenital Hypoplastic Anemia

  • Aase-Smith Ii Syndrome

  • Bds

  • Blackfan-Diamond Anemia

  • Congenital Prca

  • Congenital Hypoplastic Anemia, Blackfan-Diamond Type

  • Dba

  • Blackfan - Diamond Syndrome

  • Chronic Constitutional Pure Red Cell Anaemia

  • Anemia Diamond Blackfan Type

  • Anemia Congenital Erythroid Hypoplastic

  • Aregenerative Anemia Chronic Congenital

  • Blackfan Diamond Syndrome

  • Red Cell Aplasia, Pure Hereditary

  • Aase-Smith Syndrome Ii

  • Bda

  • Blackfan Diamond Anemia

  • Blackfan-Diamond Disease

  • Blackfan-Diamond Syndrome

  • Chronic Congenital Agenerative Anemia

  • Congenital Erythroid Hypoplastic Anemia

  • Congenital Hypoplastic Anemia Of Blackfan And Diamond

  • Congenital Pure Red Cell Anemia

  • Hypoplastic Congenital Anemia

  • Inherited Erythroblastopenia

  • Pure Hereditary Red Cell Aplasia

  • Anemia, Hypoplastic, Congenital

  • Anemia Hypoplastic Congenital

  • Fanconi Anemia

  • Constitutional Aplastic Anemia

  • Diamond-Blackfan Anemia 1

  • Aase Smith Syndrome 2

  • Congenital Red Cell Aplasia

  • Red Cell Aplasia Of Infants

  • Pure Red Cell Aplasia Of Infants

  • Congenital Red Cell Aplastic Anaemia

  • Congenital Pure Red Cell Anaemia

  • Congenital Erythroid Hypoplasia

  • Pearson Marrow-Pancreas Syndrome

Dyskeratosis Congenita
  • Dyskeratosis Congenita Autosomal Dominant

  • Dc

  • Dkc

  • Zinsser-Engman-Cole Syndrome

  • Dyskeratosis Congenita, Autosomal Dominant

  • Autosomal Dominant Dyskeratosis Congenita

  • Dkca

  • Dyskeratosis Congenita Scoggins Type

  • Zinsser-Cole-Engman Syndrome

  • X-Linked Dyskeratosis Congenita

  • Hoyeraal-Hreidarsson Syndrome

Williams-Beuren Syndrome
  • Williams Syndrome

  • WBS

  • Wms

  • Deletion 7q11.23

  • Monosomy 7q11.23

  • Chromosome 7q11.23 Deletion Syndrome, 1.5- To 1.8-Mb

  • Fanconi Schlesinger Syndrome

  • Beuren Syndrome

  • Elfin Facies Syndrome

  • Elfin Facies With Hypercalcemia

  • Hypercalcemia-Supravalvar Aortic Stenosis

  • Ws

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Felis catus EMG1 VGNC VGNC:61843
Bos taurus EMG1 VGNC VGNC:58013
Mus musculus EMG1 MGD MGI:1315195
Rattus norvegicus EMG1 RGD RGD:1307665
Canis familiaris EMG1 VGNC VGNC:58012
Macaca mulatta EMG1 VGNC VGNC:72057
Others EMG1 NCBI