PCDH11Y - protocadherin 11 Y-linked Gene
Also Known as PCDHX; PCDHY; PCDH22; PCDH-PC
Species: Homo sapiens
About PCDH11Y
This gene has 9 transcripts (splice variants), 195 orthologues and 33 paralogues. Biased expression in brain (RPKM 1.4), ovary (RPKM 0.6) and 5 other tissues.
Summary
This gene belongs to the protocadherin family, a subfamily of the Cadherin superfamily. The encoded protein consists of an extracellular domain containing seven Cadherin repeats, a transmembrane domain, and a cytoplasmic tail that differs from those of the classical Cadherins. This gene is located on the Y chromosome in a block of X/Y homology and is very closely related to its paralog on the X chromosome. The protein is thought to play a role in cell-cell recognition during development of the central nervous system. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2013]
PCDH11Y Products (5)
| mRNA | Protein | Name |
|---|---|---|
| NM_001278619.2 | NP_001265548.1 | protocadherin-11 Y-linked isoform a |
| NM_001395587.1 | NP_001382516.1 | protocadherin-11 Y-linked isoform d |
| NM_032971.3 | NP_116753.1 | protocadherin-11 Y-linked isoform a |
| NM_032972.3 | NP_116754.1 | protocadherin-11 Y-linked isoform b precursor |
| NM_032973.2 | NP_116755.1 | protocadherin-11 Y-linked isoform c precursor |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in positive regulation of Wnt signaling pathway |
IMP
IMP: Inferred from mutant phenotype
|
28241900 | GOA |
| involved in spermatogenesis |
IMP
IMP: Inferred from mutant phenotype
|
28241900 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in sperm head |
IDA
IDA: Inferred from direct assay
|
28241900 | GOA |
| located in sperm midpiece |
IDA
IDA: Inferred from direct assay
|
28241900 | GOA |
PCDH11Y Protein Structure
Cadherin_2: Cadherin-like (38 - 123)
Cadherin: Cadherin domain (156 - 251)
Cadherin: Cadherin domain (266 - 357)
Cadherin: Cadherin domain (379 - 467)
Cadherin: Cadherin domain (483 - 571)
Cadherin: Cadherin domain (586 - 674)
Cadherin: Cadherin domain (697 - 781)
Protocadherin: Protocadherin (786 - 1008)
- 0
- 300
- 600
- 900
- 1200
- 1319 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
protocadherin-11 Y-linked |
|
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Vesicoureteral Reflux |
|
|
| Schizoaffective Disorder |
|
|