IGHMBP2 - immunoglobulin mu DNA binding protein 2 Gene
Also Known as HCSA; HMN6; CATF1; CMT2S; SMARD1; SMUBP2; ZFAND7
Species: Homo sapiens
About IGHMBP2
This gene has 51 transcripts (splice variants), 188 orthologues, 10 paralogues and is associated with 5 phenotypes. Broad expression in testis (RPKM 9.6), endometrium (RPKM 3.4) and 25 other tissues.
Summary
This gene encodes a helicase superfamily member that binds a specific DNA sequence from the immunoglobulin mu chain switch region. Mutations in this gene lead to spinal muscle atrophy with respiratory distress type 1. [provided by RefSeq, Jul 2008]
IGHMBP2 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_002180.3 | NP_002171.2 | DNA-binding protein SMUBP-2 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables 5'-3' DNA helicase activity |
IDA
IDA: Inferred from direct assay
|
19158098 | GOA |
| enables 5'-3' RNA helicase activity |
IDA
IDA: Inferred from direct assay
|
19158098 | GOA |
| enables ATP binding |
IDA
IDA: Inferred from direct assay
|
19158098 | GOA |
| enables ATP hydrolysis activity |
IDA
IDA: Inferred from direct assay
|
22965130 | GOA |
| enables ATP-dependent activity, acting on DNA |
IDA
IDA: Inferred from direct assay
|
19158098 | GOA |
| enables ATP-dependent activity, acting on RNA |
IDA
IDA: Inferred from direct assay
|
19158098 | GOA |
| enables DNA binding |
IDA
IDA: Inferred from direct assay
|
19158098 | GOA |
| enables RNA binding |
IDA
IDA: Inferred from direct assay
|
19158098 | GOA |
| enables double-stranded DNA helicase activity |
IDA
IDA: Inferred from direct assay
|
30218034 | GOA |
| enables identical protein binding |
IPI
IPI: Inferred from physical interaction
|
19299493 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
19299493 | GOA |
| enables ribosome binding |
IDA
IDA: Inferred from direct assay
|
19158098 | GOA |
| enables single-stranded DNA binding |
IDA
IDA: Inferred from direct assay
|
30218034 | GOA |
| enables single-stranded RNA binding |
IDA
IDA: Inferred from direct assay
|
22965130 | GOA |
| enables tRNA binding |
IDA
IDA: Inferred from direct assay
|
19299493 | GOA |
| enables transcription factor binding |
IPI
IPI: Inferred from physical interaction
|
19299493 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in DNA duplex unwinding |
IDA
IDA: Inferred from direct assay
|
19158098 | GOA |
| involved in RNA secondary structure unwinding |
IDA
IDA: Inferred from direct assay
|
19158098 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
19299493 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
19299493 | GOA |
IGHMBP2 Protein Structure
AAA_11: AAA domain (192 - 410)
AAA_12: AAA domain (419 - 614)
R3H: R3H domain (733 - 785)
zf-AN1: AN1-like Zinc finger (897 - 937)
- 0
- 200
- 400
- 600
- 800
- 993 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
DNA-binding protein SMUBP-2 |
|
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Spinal Muscular Atrophy, Distal, Autosomal Recessive, 1 |
|
|
| Charcot-Marie-Tooth Disease, Axonal, Type 2e |
|
|
| Charcot-Marie-Tooth Hereditary Neuropathy |
|
|
| Neuronopathy, Distal Hereditary Motor, Type I |
|
|
| Spinal Muscular Atrophy |
|
|
| Ptosis |
|
|
| Peripheral Nervous System Disease |
|
|
| Charcot-Marie-Tooth Disease |
|
|
| Autosomal Recessive Distal Hereditary Motor Neuronopathy |
|
|
| Muscular Atrophy |
|
|
| Respiratory Failure |
|
|
| Motor Peripheral Neuropathy |
|
|
| Cardiomyopathy, Dilated, 1hh |
|
|
| Pontocerebellar Hypoplasia, Type 10 |
|
|
| Spinal Muscular Atrophy With Lower Extremity Predominant |
|
|
| Neuronopathy, Distal Hereditary Motor, Type Iib |
|
|
| Charcot-Marie-Tooth Disease Type 2a2a |
|
|
| Childhood Spinal Muscular Atrophy |
|
|
| Charcot-Marie-Tooth Disease, Axonal, Type 2t |
|
|
| Anterior Horn Cell Disease |
|
|
| Tooth Disease |
|
|
| Amyotrophic Lateral Sclerosis 4, Juvenile |
|
|
| Scapuloperoneal Spinal Muscular Atrophy |
|
|
| Diaphragmatic Eventration |
|
|
| Spinal Muscular Atrophy, Type I |
|
|
| Spinal Muscular Atrophy, X-Linked 2 |
|
|
| Neonatal Myasthenia Gravis |
|
|
| Distal Hereditary Motor Neuronopathy Type 2 |
|
|
| Myopathy, Myofibrillar, 6 |
|
|
| Charcot-Marie-Tooth Disease, Axonal, Type 2b2 |
|
|
| Charcot-Marie-Tooth Disease, Axonal, Type 2r |
|
|
| Lethal Restrictive Dermopathy |
|
|
| Neuropathy, Congenital Hypomyelinating, 1, Autosomal Recessive |
|
|
| Autosomal Dominant Distal Hereditary Motor Neuronopathy |
|
|
| Distal Hereditary Motor Neuronopathy Type 7 |
|
|
| Neuropathy, Hereditary Sensory And Autonomic, Type Ia |
|
|
| Myopathy, Areflexia, Respiratory Distress, And Dysphagia, Early-Onset |
|
|
| Charcot-Marie-Tooth Disease, Axonal, Type 2d |
|
|
| Yunis-Varon Syndrome |
|
|
| Charcot-Marie-Tooth Disease, Axonal, Type 2b1 |
|
|
| Spinal Muscular Atrophy, Type Iii |
|
|
| Neuropathy, Hereditary Sensory And Autonomic, Type Iia |
|
|
| Spinocerebellar Ataxia, Autosomal Recessive, With Axonal Neuropathy 2 |
|
|
| Distal Arthrogryposis |
|
|
| Brown-Vialetto-Van Laere Syndrome |
|
|
| Neuronopathy, Distal Hereditary Motor, Type Va |
|
|
| Neuromuscular Disease |
|
|
| Hypertrophic Neuropathy Of Dejerine-Sottas |
|
|
| Congenital Myasthenic Syndrome |
|
|
| Hereditary Spastic Paraplegia |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Canis familiaris | IGHMBP2 | VGNC | VGNC:41910 |
| Bos taurus | IGHMBP2 | VGNC | VGNC:30092 |
| Macaca mulatta | IGHMBP2 | VGNC | VGNC:82163 |
| Rattus norvegicus | IGHMBP2 | RGD | RGD:68325 |
| Felis catus | IGHMBP2 | VGNC | VGNC:67720 |
| Mus musculus | IGHMBP2 | MGD | MGI:99954 |
| Others | IGHMBP2 | NCBI |