COL5A3 - collagen type V alpha 3 chain Gene
生物種: Homo sapiens
About COL5A3
This gene has 2 transcripts (splice variants), 86 orthologues and 37 paralogues. Broad expression in placenta (RPKM 20.1), fat (RPKM 19.6) and 20 other tissues.
Summary
This gene encodes an alpha chain for one of the low abundance fibrillar collagens. Fibrillar Collagen molecules are trimers that can be composed of one or more types of alpha chains. Type V Collagen is found in tissues containing type I Collagen and appears to regulate the assembly of heterotypic fibers composed of both type I and type V Collagen. This gene product is closely related to type XI Collagen and it is possible that the Collagen chains of types V and XI constitute a single Collagen type with tissue-specific chain combinations. Mutations in this gene are thought to be responsible for the symptoms of a subset of patients with Ehlers-Danlos syndrome type III. Messages of several sizes can be detected in northern blots but sequence information cannot confirm the identity of the shorter messages. [provided by RefSeq, Jul 2008]
COL5A3 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_015719.4 | NP_056534.2 | collagen alpha-3(V) chain preproprotein |
COL5A3 Protein Structure
Collagen: Collagen triple helix repeat (20 copies) (391 - 440)
Collagen: Collagen triple helix repeat (20 copies) (482 - 538)
Collagen: Collagen triple helix repeat (20 copies) (824 - 877)
Collagen: Collagen triple helix repeat (20 copies) (905 - 950)
Collagen: Collagen triple helix repeat (20 copies) (932 - 989)
Collagen: Collagen triple helix repeat (20 copies) (1430 - 1488)
COLFI: Fibrillar collagen C-terminal domain (1530 - 1743)
- 0
- 300
- 600
- 900
- 1200
- 1500
- 1745 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
collagen alpha-3(V) chain |
|
関連疾患
| Diseases | Alias | |
|---|---|---|
| Ehlers-Danlos Syndrome |
|
|
| Colon Small Cell Carcinoma |
|
Orthologs Information
| 生物種 | Symbol | 由来 | ID |
|---|---|---|---|
| Macaca mulatta | COL5A3 | VGNC | VGNC:109604 |
| Mus musculus | COL5A3 | MGD | MGI:1858212 |
| Bos taurus | COL5A3 | VGNC | VGNC:27569 |
| Felis catus | COL5A3 | VGNC | VGNC:102030 |
| Canis familiaris | COL5A3 | VGNC | VGNC:39479 |
| Rattus norvegicus | COL5A3 | RGD | RGD:70922 |
| Others | COL5A3 | NCBI |