The Discovery of a Dual TTK Protein Kinase/CDC2-Like Kinase (CLK2) Inhibitor for the Treatment of Triple Negative Breast Cancer Initiated from a Phenotypic Screen

  • J Med Chem. 2017 Nov 9;60(21):8989-9002. doi: 10.1021/acs.jmedchem.7b01223.
Jennifer R Riggs  1 Mark Nagy  1 Jan Elsner  1 Paul Erdman  1 Dan Cashion  1 Dale Robinson  1 Roy Harris  1 Dehua Huang  1 Lida Tehrani  1 Gordafaried Deyanat-Yazdi  1 Rama Krishna Narla  1 Xiaohui Peng  1 Tam Tran  1 Leo Barnes  1 Terra Miller  1 Jason Katz  1 Yang Tang  1 Ming Chen  1 Mehran F Moghaddam  1 Sogole Bahmanyar  1 Barbra Pagarigan  1 Silvia Delker  1 Laurie LeBrun  1 Philip P Chamberlain  1 Andrew Calabrese  1 Stacie S Canan  1 Katerina Leftheris  1 Dan Zhu  1 John F Boylan  1
Affiliations
  • 1. Celgene Corporation , 10300 Campus Pointe Drive, Suite 100, San Diego, California 92121, United States.
Abstract

Triple negative breast Cancer (TNBC) remains a serious unmet medical need with discouragingly high relapse rates. We report here the synthesis and structure-activity relationship (SAR) of a novel series of 2,4,5-trisubstituted-7H-pyrrolo[2,3-d]pyrimidines with potent activity against TNBC tumor cell lines. These compounds were discovered from a TNBC phenotypic screen and possess a unique dual inhibition profile targeting TTK (mitotic exit) and CLK2 (mRNA splicing). Design and optimization, driven with a TNBC tumor cell assay, identified potent and selective compounds with favorable in vitro and in vivo activity profiles and good iv PK properties. This cell-based driven SAR produced compounds with strong single agent in vivo efficacy in multiple TNBC xenograft models without significant body weight loss. These data supported the nomination of CC-671 into IND-enabling studies as a single agent TNBC therapy.

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