Prolyl-tRNA synthetase as a novel therapeutic target in multiple myeloma

  • Blood Cancer J. 2023 Jan 12;13(1):12. doi: 10.1038/s41408-023-00787-w.
Keiji Kurata  #  1 Anna James-Bott  #  2 Mark A Tye  3  4  5 Leona Yamamoto  1 Mehmet K Samur  1  6  7 Yu-Tzu Tai  1 James Dunford  2 Catrine Johansson  2 Filiz Senbabaoglu  2 Martin Philpott  2 Charlotte Palmer  2 Karthik Ramasamy  8  9 Sarah Gooding  8  10 Mihaela Smilova  2 Giorgia Gaeta  2 Manman Guo  2 John C Christianson  2  8 N Connor Payne  3  11 Kritika Singh  3  12 Kubra Karagoz  13 Matthew E Stokes  13 Maria Ortiz  13 Patrick Hagner  13 Anjan Thakurta  8  13 Adam Cribbs  2  8 Ralph Mazitschek  3  5  14 Teru Hideshima  15 Kenneth C Anderson  16 Udo Oppermann  17  18
Affiliations
  • 1. Jerome Lipper Multiple Myeloma Center, LeBow Institute for Myeloma Therapeutics, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, 02215, USA.
  • 2. Botnar Research Centre, Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences, University of Oxford, Oxford, OX3 7LD, UK.
  • 3. Center for Systems Biology, Massachusetts General Hospital, Boston, MA, 02114, USA.
  • 4. Harvard Graduate School of Arts and Sciences, Cambridge, MA, 02138, USA.
  • 5. Harvard T.H. Chan School of Public Health, Boston, MA, 02115, USA.
  • 6. Department of Biostatistics, Harvard T. H. Chan School of Public Health, Boston, MA, 02115, USA.
  • 7. Department of Data Science, Dana-Farber Cancer Institute, Boston, MA, 02215, USA.
  • 8. Oxford Centre for Translational Myeloma Research, Botnar Research Centre, University of Oxford, Oxford, OX3 7LD, UK.
  • 9. Radcliffe Department of Medicine, University of Oxford, Oxford, OX3 7LD, UK.
  • 10. Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, OX3 7LD, UK.
  • 11. Department of Chemistry & Chemical Biology, Harvard University, Cambridge, MA, 02138, USA.
  • 12. Department of Bioengineering, Northeastern University, Boston, MA, 02115, USA.
  • 13. Bristol Myers Squibb, Summit, NJ, 07901, USA.
  • 14. Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.
  • 15. Jerome Lipper Multiple Myeloma Center, LeBow Institute for Myeloma Therapeutics, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, 02215, USA. [email protected].
  • 16. Jerome Lipper Multiple Myeloma Center, LeBow Institute for Myeloma Therapeutics, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, 02215, USA. [email protected].
  • 17. Botnar Research Centre, Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Sciences, University of Oxford, Oxford, OX3 7LD, UK. [email protected].
  • 18. Oxford Centre for Translational Myeloma Research, Botnar Research Centre, University of Oxford, Oxford, OX3 7LD, UK. [email protected].
  • # Contributed equally.
Abstract

Multiple myeloma (MM) is a plasma cell malignancy characterised by aberrant production of immunoglobulins requiring survival mechanisms to adapt to proteotoxic stress. We here show that glutamyl-prolyl-tRNA synthetase (GluProRS) inhibition constitutes a novel therapeutic target. Genomic data suggest that GluProRS promotes disease progression and is associated with poor prognosis, while downregulation in MM cells triggers Apoptosis. We developed NCP26, a novel ATP-competitive ProRS inhibitor that demonstrates significant anti-tumour activity in multiple in vitro and in vivo systems and overcomes metabolic adaptation observed with Other inhibitor chemotypes. We demonstrate a complex phenotypic response involving protein quality control mechanisms that centers around the ribosome as an integrating hub. Using systems approaches, we identified multiple downregulated proline-rich motif-containing proteins as downstream effectors. These include CD138, transcription factors such as MYC, and transcription factor 3 (TCF3), which we establish as a novel determinant in MM pathobiology through functional and genomic validation. Our preclinical data therefore provide evidence that blockade of prolyl-aminoacylation evokes a complex pro-apoptotic response beyond the canonical integrated stress response and establish a framework for its evaluation in a clinical setting.

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