Optimization and biological evaluation of l-DOPA derivatives as potent influenza PAN endonuclease inhibitors with multi-site binding characteristics

  • Bioorg Chem. 2024 Jan 19:144:107139. doi: 10.1016/j.bioorg.2024.107139.
Jiaai Ruan  1 Kunyu Lu  2 Jianfu He  2 Yihao Chen  1 Baixi Li  1 Xin Wan  3 Xiao Chen  1 Sumei Li  4 Shuwen Liu  5 Gaopeng Song  6
Affiliations
  • 1. Key Laboratory for Biobased Materials and Energy of Ministry of Education, College of Materials and Energy, South China Agricultural University, Guangzhou 510642, China.
  • 2. Guangdong Provincial Key Laboratory of New Drug Screening, School of Pharmaceutical Sciences, Southern Medical University, Guangzhou 510515, China.
  • 3. Huizhou Health Sciences Polytechnic, Huizhou 516025, China.
  • 4. Department of Human Anatomy, College of Basic Medicine and Public Hygiene, Jinan University, Guangzhou 510632, China. Electronic address: [email protected].
  • 5. Guangdong Provincial Key Laboratory of New Drug Screening, School of Pharmaceutical Sciences, Southern Medical University, Guangzhou 510515, China; State Key Laboratory of Organ Failure Research, Guangdong Provincial Institute of Nephrology, Southern Medical University, Guangzhou, 510515, China. Electronic address: [email protected].
  • 6. Key Laboratory for Biobased Materials and Energy of Ministry of Education, College of Materials and Energy, South China Agricultural University, Guangzhou 510642, China. Electronic address: [email protected].
Abstract

Emerging and potential influenza pandemics still are an enormous worldwide public health challenge. The PAN Endonuclease has been proved to be a promising target for anti-influenza drug design. Here, we report the discovery and optimization of potent Y-shaped PAN inhibitors featuring multi-site binding characteristics with l-DOPA as a starting point. We systematically modified the hit 1 bearing two-binding characteristics based on structure-based rational design combined with multisite binding and conformational constraint strategies, generating four families of l-DOPA derivatives for SARs analysis. Among these substances, N, 3-di-substituted 1, 2, 3, 4-tetrahydroisoquinoline derivative T-31 displayed superior properties as a lead PAN Endonuclease Inhibitor and Antiviral agent. The lead T-31 inhibited PAN Endonuclease activity with an IC50 value of 0.15 μM and showed broad and submicromolar anti-influenza potency in cell-based assays. More importantly, T-31 could simultaneously target both influenza HA and the RdRp complex, thus interfering with virus entry into host cells and viral replication. This study offers a set of novel PAN Endonuclease inhibitors with multi-site binding characteristics starting from the l-DOPA skeleton.

Keywords
Influenza A virus; PA(N) endonuclease inhibitors; Structure–activity relationship; l-DOPA derivatives.
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