Enhancing anti-tumor immunity of natural killer cells through targeting IL-15R signaling

  • Cancer Cell. 2025 Jun 10:S1535-6108(25)00220-X. doi: 10.1016/j.ccell.2025.05.011.
Iva Nikolic  1 Joseph Cursons  1 Benjamin Shields  1 Stephane Chappaz  1 Harrison Sudholz  2 Xiangpeng Meng  2 Patrick Constantinescu  1 Reshma Vijayakumaran  1 Michael D'Angelo  1 Momeneh Foroutan  1 David Ladd  1 Matthew Veldman  1 Jason Glab  1 Tahlia Procter  1 Hae-Young Park  2 Julian Contet  1 Felix Deuss  1 Kahlia Wong  1 Yi Sun  3 Richard Berry  1 Jai Rautela  4 Nicholas D Huntington  5
Affiliations
  • 1. oNKo-innate Pty Ltd., Moonee Ponds, VIC 3039, Australia.
  • 2. Biomedicine Discovery Institute and the Department of Biochemistry and Molecular Biology, Monash University, Clayton, VIC 3800, Australia.
  • 3. Institute of Translational Medicine, Zhejiang University School of Medicine, Hangzhou, China.
  • 4. oNKo-innate Pty Ltd., Moonee Ponds, VIC 3039, Australia. Electronic address: [email protected].
  • 5. oNKo-innate Pty Ltd., Moonee Ponds, VIC 3039, Australia; Biomedicine Discovery Institute and the Department of Biochemistry and Molecular Biology, Monash University, Clayton, VIC 3800, Australia. Electronic address: [email protected].
Abstract

Interleukin-15 receptor (IL-15R) agonists induce anti-tumor immunity in pre-clinical models. However, dose-limiting toxicity has hampered their clinical development. We performed genome-wide CRISPR screens to reveal the complete IL-15R signaling mechanism in natural killer (NK) cells and discovered that ubiquitin-dependent IL-15R degradation is the dominant mechanism restraining IL-15R signaling. Key hits included the NEDD8 E2-conjugating enzyme UBE2F, the ubiquitin E3-ligase ARIH2, and Cullin-5 RING E3 Ligase (CRL5) members. We found that UBE2F was required for neddylation and activation of CUL5, whereas ARIH2 contributed to CRL5-mediated IL-15RB degradation. Ablation of ARIH2 or UBE2F increased IL-15RB surface expression and enhanced signaling, resulting in proinflammatory cytokine production and augmented natural and CAR-mediated cytotoxicity. In mice lacking Arih2, Rnf7, or Ube2f, we observed that the IL-15R hyperresponsive NK cells exhibited superior in vivo anti-tumor immunity against primary and disseminated metastatic tumors. Thus, we have identified the Enzymes UBE2F and ARIH2 as tractable immunotherapy drug targets.

Keywords
CRISPR screening; cytokine receptors; cytokine signaling; interleukin-15; natural killer cells; post-translational modifications.
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