Orally Bioavailable Cyclin A/B RxL Inhibitors: Optimization of a Novel Class of Macrocyclic Peptides That Target E2F-High and G1-S-Checkpoint-Compromised Cancers

  • J Med Chem. 2026 Mar 12;69(5):5441-5460. doi: 10.1021/acs.jmedchem.5c02445.
Justin A Shapiro  1 Nathan J Dupper  1 Breena Fraga-Walton  1 Andrew T Bockus  1 Siegfried S F Leung  1 Kai Yang  1 Chinmay Bhatt  1 Megan K DeMart  1 Miguel P Baldomero  1 Luis Hernandez  1 Gabriel Fung  1 Sammy Metobo  1 Steven Xie  1 Bryan M Lent  1 David C Spellmeyer  1 Joshua Luna  1 Dalena Hoang  1 Manesh Chand  1 Yuliana Gritsenko  1 Catherine E Gleason  1 Frances Hamkins-Indik  1 Jie Zheng  1 Ranya Odeh  1 Meisam Nosrati  1 Daphne He  1 Ramesh Bambal  1 Peadar Cremin  1 Jinshu Fang  1 Bernard Levin  1 Evelyn W Wang  1 Marie Evangelista  1 David Earp  1 Constantine Kreatsoulas  1 Rajinder Singh  1 Pablo D Garcia  1 James B Aggen  1
Affiliations
  • 1. Circle Pharma, 169 Harbor Way, South San Francisco, California 94080, United States.
Abstract

Cyclins A and B bind and activate their cognate cyclin-dependent kinase (CDK) to regulate progression through the S and G2/M phases of the cell cycle, respectively. Cyclins recruit substrates and regulators through the binding of an RxL motif with a Hydrophobic Patch (HP) on the cyclin surface. We recently disclosed the first class of passively permeable macrocyclic peptides that bind to the HP of both Cyclin A and Cyclin B and selectively kill Cancer cells with high E2F activity. We used a lead example to demonstrate in vivo tumor regression in cell-line-derived xenograft models of small-cell lung Cancer (SCLC) via intraperitoneal dosing. Here we describe the optimization of this series for drug-like properties and oral bioavailability, resulting in the discovery of a lead compound, which demonstrates tumor regression in CDX models of SCLC via oral dosing. We are currently evaluating Cyclin A/B inhibition in a Phase 1 clinical trial.

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