Orally Bioavailable Cyclin A/B RxL Inhibitors: Optimization of a Novel Class of Macrocyclic Peptides That Target E2F-High and G1-S-Checkpoint-Compromised Cancers

  • J Med Chem. 2026 Mar 12;69(5):5441-5460. doi: 10.1021/acs.jmedchem.5c02445.
Justin A Shapiro  1 ,  Nathan J Dupper  1 ,  Breena Fraga-Walton  1 ,  Andrew T Bockus  1 ,  Siegfried S F Leung  1 ,  Kai Yang  1 ,  Chinmay Bhatt  1 ,  Megan K DeMart  1 ,  Miguel P Baldomero  1 ,  Luis Hernandez  1 ,  Gabriel Fung  1 ,  Sammy Metobo  1 ,  Steven Xie  1 ,  Bryan M Lent  1 ,  David C Spellmeyer  1 ,  Joshua Luna  1 ,  Dalena Hoang  1 ,  Manesh Chand  1 ,  Yuliana Gritsenko  1 ,  Catherine E Gleason  1 ,  Frances Hamkins-Indik  1 ,  Jie Zheng  1 ,  Ranya Odeh  1 ,  Meisam Nosrati  1 ,  Daphne He  1 ,  Ramesh Bambal  1 ,  Peadar Cremin  1 ,  Jinshu Fang  1 ,  Bernard Levin  1 ,  Evelyn W Wang  1 ,  Marie Evangelista  1 ,  David Earp  1 ,  Constantine Kreatsoulas  1 ,  Rajinder Singh  1 ,  Pablo D Garcia  1 ,  James B Aggen  1
Affiliations
  • 1. Circle Pharma, 169 Harbor Way, South San Francisco, California 94080, United States.
Abstract

Cyclins A and B bind and activate their cognate cyclin-dependent kinase (CDK) to regulate progression through the S and G2/M phases of the cell cycle, respectively. Cyclins recruit substrates and regulators through the binding of an RxL motif with a Hydrophobic Patch (HP) on the cyclin surface. We recently disclosed the first class of passively permeable macrocyclic Peptides that bind to the HP of both Cyclin A and Cyclin B and selectively kill Cancer cells with high E2F activity. We used a lead example to demonstrate in vivo tumor regression in cell-line-derived xenograft models of small-cell Lung Cancer (SCLC) via intraperitoneal dosing. Here we describe the optimization of this series for drug-like properties and oral bioavailability, resulting in the discovery of a lead compound, which demonstrates tumor regression in CDX models of SCLC via oral dosing. We are currently evaluating Cyclin A/B inhibition in a Phase 1 clinical trial.

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