Identification of 14-3-3 Proteins as Binding Partners of TRP Channels

  • J Chem Inf Model. 2026 Apr 13;66(7):3987-3998. doi: 10.1021/acs.jcim.6c00092.
Nicolás Peña-Vilches  1  2 Mariela González-Avendaño  1  2 Nicole Soto-García  3 Diego Maureira  4 Ian Silva  4  5 Javiera Avilés  6 Elías Manríquez-Benítez  6 Exequiel Medina  6 Oscar Cerda  4 Pablo Galaz-Davison  2 Ariela Vergara-Jaque  2
Affiliations
  • 1. Doctoral Program in Sciences with a Specialization in Modeling of Chemical and Biological Systems, Faculty of Engineering, Universidad de Talca, Talca 3460000, Chile.
  • 2. Center for Bioinformatics, Simulation and Modeling, Faculty of Engineering, Universidad de Talca, Talca 3460000, Chile.
  • 3. Department of Computer Engineering, Universidad de Magallanes, Punta Arenas 6210427, Chile.
  • 4. Núcleo Interdisciplinario de Biología y Genética, Instituto de Ciencias Biomédicas, Facultad de Medicina, Universidad de Chile, Santiago 8380453, Chile.
  • 5. Center for Precision Oncology, Universidad Mayor, Huechuraba, Santiago 8580745, Chile.
  • 6. Department of Biochemistry and Molecular Biology, Faculty of Chemical and Pharmaceutical Sciences, Universidad de Chile, Santiago 8380453, Chile.
Abstract

Transient receptor potential (TRP) channels are regulated by a diverse network of intracellular partners that govern their trafficking, stability, and functional expression at the plasma membrane. Here, we present a comprehensive and integrative characterization of 14-3-3 proteins as conserved binding partners of TRP channels. Leveraging the extensive structural repertoire of 14-3-3 complexes resolved to date, we combined large-scale sequence and structural analyses with molecular docking, coevolutionary inference, machine learning-based predictions, atomistic simulations, and targeted experimental validation to elucidate the molecular principles underlying TRP-14-3-3 recognition. Integration of these approaches into a unified consensus scoring framework revealed recurrent, solvent-exposed cytoplasmic motifs across the TRP Channel family with a high propensity for 14-3-3 binding. Focusing on the TRPM4-14-3-3γ interaction, we identified an N-terminal cytoplasmic region of the channel as the primary 14-3-3 binding hotspot. Structural modeling and molecular dynamics simulations revealed a stable electrostatically driven interface, which was experimentally validated by fluorescence anisotropy assays. Moreover, biochemical and functional analyses demonstrated that TRPM4 interacts not only with 14-3-3γ but also with 14-3-3η, leading to a reduced channel-mediated sodium influx. Together, these findings establish 14-3-3 proteins as general and evolutionarily conserved regulators of TRP channels and provide a broadly applicable framework for identifying transient protein-protein interactions relevant to TRP Channel dysregulation in disease.

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