LINC00607 facilitates endothelial VEGF-A receptor FLT1 splicing

  • Mol Ther. 2026 Jul 1;34(7):4323-4338. doi: 10.1016/j.ymthe.2026.03.038.
Frederike Lam  1 ,  Timothy Warwick  1 ,  James A Oo  1 ,  Agnes Y Krüger  2 ,  Nina-Naomi Kreis  3 ,  Anastasiia Diagel  4 ,  Judit Izquierdo Ponce  2 ,  Praveenya Tirunagari  2 ,  Marie E Bayer  2 ,  Olivia Nonn  5 ,  Ralf Dechend  6 ,  Thomas Walther  7 ,  Reinier A Boon  8 ,  Andrew H Baker  9 ,  Stefan Günther  10 ,  Ilka Wittig  1 ,  Zhifen Chen  4 ,  Michaela Müller-McNicoll  11 ,  Frank Louwen  3 ,  Ralf P Brandes  1 ,  Matthias S Leisegang  12
Affiliations
  • 1. Goethe University, Institute for Cardiovascular Physiology, Frankfurt, Germany; German Center of Cardiovascular Research (DZHK), Partner Site RheinMain, Frankfurt, Germany.
  • 2. Goethe University, Institute for Cardiovascular Physiology, Frankfurt, Germany.
  • 3. Goethe University, University Hospital Frankfurt, Division of Obstetrics and Prenatal Medicine, Frankfurt, Germany.
  • 4. Technical University of Munich, Department of Cardiology, German Heart Centre Munich, School of Medicine and Health, Munich, Germany; DZHK, Partner Site Munich Heart Alliance, Munich, Germany.
  • 5. Charité - Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany; DZHK, Berlin, Germany.
  • 6. Charité - Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany; DZHK, Berlin, Germany; HELIOS Klinikum Berlin-Buch, Department of Cardiology and Nephrology, Berlin, Germany.
  • 7. Goethe University, University Hospital Frankfurt, Department of Cardiovascular Surgery, Frankfurt, Germany.
  • 8. German Center of Cardiovascular Research (DZHK), Partner Site RheinMain, Frankfurt, Germany; Goethe University, Institute for Cardiovascular Regeneration, Centre for Molecular Medicine, Frankfurt, Germany; Department of Physiology, Amsterdam Cardiovascular Sciences, VU Medical Center, Amsterdam UMC, Amsterdam, the Netherlands.
  • 9. Institute for Neuroscience and Cardiovascular Research, University of Edinburgh, Edinburgh, Scotland; CARIM Institute, University of Maastricht, Maastricht, the Netherlands.
  • 10. Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany.
  • 11. Goethe University Frankfurt, Institute for Molecular Biosciences, Frankfurt, Germany; Max Planck Institute for Biophysics, Frankfurt, Germany.
  • 12. Goethe University, Institute for Cardiovascular Physiology, Frankfurt, Germany; German Center of Cardiovascular Research (DZHK), Partner Site RheinMain, Frankfurt, Germany. Electronic address: [email protected].
Abstract

Angiogenesis is a key function of vascular endothelial cells and becomes aberrant in pathologies such as preeclampsia. An important mediator of angiogenesis is vascular endothelial growth factor (VEGF) receptor FLT1; however, alternative splicing of FLT1 can generate soluble FLT1 (sFLT1), a decoy receptor that inhibits VEGF signaling. While some long non-coding RNAs (lncRNAs) are known to regulate splicing, their roles in endothelial biology remain poorly defined. Here, we identify lncRNA LINC00607 as a critical regulator of FLT1 alternative splicing. Loss of LINC00607 increased the formation of the anti-angiogenic sFLT1. CRISPR-mediated knockout of LINC00607 promoted exon 15 inclusion in FLT1, elevating sFLT1 levels and blunting VEGF-driven angiogenesis-a defect reversed by sFLT1-neutralizing antibodies. LINC00607 interacted with U2 small nuclear RNA (snRNA) to regulate exon 15 inclusion in FLT1, an interaction dependent on the chromatin-remodeler BRG1. A splice-blocking morpholino targeting the FLT1 intron14/exon15 junction specifically inhibited sFLT1 production by interacting with LINC00607 and U2 snRNA, and its application increased VEGF-A-mediated sprouting. LINC00607 expression inversely correlated with sFLT1 levels in vascular diseases. In preeclampsia, a multisystem pregnancy disorder involving Hypertension and proteinuria, LINC00607 was downregulated in early and late-stage preeclampsia compared with healthy pregnancies. LINC00607 therefore fine-tunes VEGF signaling and might contribute to the pathophysiology of preeclampsia.

Keywords
LINC00607; VEGF; angiogenesis; long non-coding RNA; morpholino; preeclampsia; sFLT1; soluble FMS-like tyrosine kinase-1; splicing; vascular endothelial growth factor.
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