1. Gene
  2. BCL11A - BCL11 transcription factor A Gene

BCL11A - BCL11 transcription factor A Gene

Homo sapiens

Also known as EVI9; CTIP1; DILOS; ZNF856; HBFQTL5; SMARCM1

Gene ID: 53335 | Gene type: protein coding

About BCL11A

Cytogenetic location: 2p16.1 Genomic coordinates (GRCh38): 2:60,450,520-60,553,654 (from NCBI)

This gene has 27 transcripts (splice variants), 212 orthologues, 14 paralogues and is associated with 79 phenotypes. Broad expression in skin (RPKM 2.8), lymph node (RPKM 2.2) and 17 other tissues.

Summary

This gene encodes a C2H2 type zinc-finger protein by its similarity to the mouse Bcl11a/Evi9 protein. The corresponding mouse gene is a common site of retroviral integration in myeloid leukemia, and may function as a leukemia disease gene, in part, through its interaction with BCL6. During hematopoietic cell differentiation, this gene is down-regulated. It is possibly involved in lymphoma pathogenesis since translocations associated with B-cell malignancies also deregulates its expression. Multiple transcript variants encoding several different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

BCL11A Products(34)

mRNA Protein Name
NM_001363864.1 NP_001350793.1 B-cell lymphoma/leukemia 11A isoform 4
NM_001365609.1 NP_001352538.1 B-cell lymphoma/leukemia 11A isoform 5
NM_001405708.1 NP_001392637.1 B-cell lymphoma/leukemia 11A isoform 1
NM_001405709.1 NP_001392638.1 B-cell lymphoma/leukemia 11A isoform 1
NM_001405710.1 NP_001392639.1 B-cell lymphoma/leukemia 11A isoform 6
NM_001405711.1 NP_001392640.1 B-cell lymphoma/leukemia 11A isoform 5
NM_001405712.1 NP_001392641.1 B-cell lymphoma/leukemia 11A isoform 5
NM_001405713.1 NP_001392642.1 B-cell lymphoma/leukemia 11A isoform 15
NM_001405714.1 NP_001392643.1 B-cell lymphoma/leukemia 11A isoform 15
NM_001405715.1 NP_001392644.1 B-cell lymphoma/leukemia 11A isoform 15
NM_001405716.1 NP_001392645.1 B-cell lymphoma/leukemia 11A isoform 7
NM_001405717.1 NP_001392646.1 B-cell lymphoma/leukemia 11A isoform 16
NM_001405718.1 NP_001392647.1 B-cell lymphoma/leukemia 11A isoform 16
NM_001405719.1 NP_001392648.1 B-cell lymphoma/leukemia 11A isoform 8
NM_001405720.1 NP_001392649.1 B-cell lymphoma/leukemia 11A isoform 17
NM_001405721.1 NP_001392650.1 B-cell lymphoma/leukemia 11A isoform 17
NM_001405722.1 NP_001392651.1 B-cell lymphoma/leukemia 11A isoform 18
NM_001405723.1 NP_001392652.1 B-cell lymphoma/leukemia 11A isoform 18
NM_001405724.1 NP_001392653.1 B-cell lymphoma/leukemia 11A isoform 9
NM_001405725.1 NP_001392654.1 B-cell lymphoma/leukemia 11A isoform 19
NM_001405726.1 NP_001392655.1 B-cell lymphoma/leukemia 11A isoform 19
NM_001405727.1 NP_001392656.1 B-cell lymphoma/leukemia 11A isoform 19
NM_001405728.1 NP_001392657.1 B-cell lymphoma/leukemia 11A isoform 19
NM_001405729.1 NP_001392658.1 B-cell lymphoma/leukemia 11A isoform 10
NM_001405730.1 NP_001392659.1 B-cell lymphoma/leukemia 11A isoform 11
NM_001405731.1 NP_001392660.1 B-cell lymphoma/leukemia 11A isoform 12
NM_001405732.1 NP_001392661.1 B-cell lymphoma/leukemia 11A isoform 3
NM_001405733.1 NP_001392662.1 B-cell lymphoma/leukemia 11A isoform 13
NM_001405734.1 NP_001392663.1 B-cell lymphoma/leukemia 11A isoform 20
NM_001405735.1 NP_001392664.1 B-cell lymphoma/leukemia 11A isoform 20
NM_001405736.1 NP_001392665.1 B-cell lymphoma/leukemia 11A isoform 14
NM_018014.4 NP_060484.2 B-cell lymphoma/leukemia 11A isoform 2
NM_022893.4 NP_075044.2 B-cell lymphoma/leukemia 11A isoform 1
NM_138559.2 NP_612569.1 B-cell lymphoma/leukemia 11A isoform 3

BCL11A Protein Structure

zf-C2H2_6

zf-C2H2_6: C2H2-type zinc finger (46 - 72)

zf-H2C2_2

zf-H2C2_2: Zinc-finger double domain (391 - 415)

zf-H2C2_2

zf-H2C2_2: Zinc-finger double domain (756 - 780)

zf-C2H2

zf-C2H2: Zinc finger, C2H2 type (800 - 823)

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  • 835 a.a.
Protein Preferred Names Protein Names

B-cell lymphoma/leukemia 11A

B cell CLL/lymphoma 11A

Related Diseases

Diseases Alias
Intellectual Developmental Disorder With Persistence Of Fetal Hemoglobin

Dias-Logan Syndrome

Intellectual Developmental Disorder With Hereditary Persistence Of Fetal Hemoglobin

IDPFH

Hereditary Persistence Of Fetal Hemoglobin-Intellectual Disability Syndrome

Dias-Logan Syndrome

Corpus Callosum, Agenesis Of

Corpus Callosum Agenesis

Agenesis Of The Corpus Callosum

Isolated Corpus Callosum Agenesis

Acc

Non Rare In Europe: Isolated Corpus Callosum Agenesis

Congenital Malformation Of Corpus Callosum

Deformity Of Corpus Callosum

Absence Of Corpus Callosum

Absent Corpus Callosum

Acc - [Agenesis Of Corpus Callosum]

Aplasia Of Corpus Callosum

Congenital Absence Of Corpus Callosum

Hypoplastic Corpus Callosum

Hypoplasia Of Corpus Callosum

Intellectual Disability - Hypoplastic Corpus Callosum - Preauricular Tag

Da Silva Syndrome

Intellectual Disability-Hypoplastic Corpus Callosum-Preauricular Tag Syndrome

Polydactyly, Postaxial, Type A1

Postaxial Polydactyly Type A

Polydactyly, Postaxial

Postaxial Polydactyly

PAPA1

Postaxial Polydactyly, Type A

Papa

Polydactyly, Postaxial, Types A1 And B

Postaxial Polydactyly Type B

Polydactyly Postaxial

Polydactyly, Postaxial A1

Polydactyly, Postaxial B

PAPB

Postaxial Polydactyly, Type A1/B

Polydactyly, Postaxial, Type A

Pyogenic Arthritis, Pyoderma Gangrenosum And Acne

Postaxial Polydactyly, Type B

Fetal Hemoglobin Quantitative Trait Locus 5

Fetal Hemoglobin Qtl5

HBFQTL5

Bcl11a-Related Intellectual Disability

Dias-Logan Syndrome

Intellectual Developmental Disorder With Persistence Of Fetal Hemoglobin

Hereditary Persistence Of Fetal Hemoglobin-Sickle Cell Disease Syndrome

Hpfh-Sickle Cell Disease Syndrome

B-Cell Lymphoma

Lymphoma, B-Cell

B-Cell Lymphomas

B-Cell Lymphocytic Neoplasm

Lymphoma B-Cell

B-Cell Lymphoma Nos

Lymphoma

Lymphoid Cancer

Lymphomas

Lymphoid Cancers

Lymphoid Neoplasm

Lymphoma Nos

Nhl - [Non-Hodgkin Lymphoma]

Non-Hodgkin Lymphoma

Non-Hodgkin Lymphoma, Nos

Non-Hodgkin Malignant Lymphoma Nos

Cerebellar Hypoplasia/Atrophy, Epilepsy, And Global Developmental Delay

CHEGDD

Sickle Cell Anemia

Hemoglobin Sc Disease

Anemia, Sickle Cell

Hbsc Disease

Sickle Cell-Hemoglobin C Disease Syndrome

Hb Ss Disease

Sickle Cell Trait

Drepanocytosis

Haemoglobin Sc Disease

Hb Sc Disease

Hb-S/Hb-C Disease

Hb-Ss Disease Without Crisis

Hemoglobin S Disease Without Crisis

Sickle Cell Anaemia

Sickle-Cell/Hb-C Disease Without Crisis

Sickle Cell - Hemoglobin C Disease

Hbs Disease

Hemoglobin S Disease

Sickling Disorder Due To Hemoglobin S

SKCA

Sickle Cell Disease

Sickle Cell-Hemoglobin C Disease

Sickle-Cell Disease Carrier

Sickle-Cell Heterozygous Disorder

Haemoglobin A-S Genotype

Hb-S - [Sickle Cell Haemoglobin] Carrier

Sickle Cell Haemoglobin Trait

As - [Sickle Cell Trait]

Hbas - [Sickle Cell Haemoglobin Trait]

Sickle-Cell Trait Haemoglobin Disease

Haemoglobin Sickle Cell Trait Disorder

Heterozygous Sickle Cell Trait

Hbas - [Heterozygous Haemoglobin S]

Leukemia

Leukemias

Leukaemia, Unspecified, Without Mention Of Remission

Aleukemic Leukaemia

Chronic Leukaemia

Subacute Leukaemia

Leukaemia Disorder

Leukaemia Nos

Microcephaly

Microencephaly

Microcephalus

Microcephalic

Nanocephaly

Congenital Microcephaly

Brain Hypoplasia

Brain Nondevelopment

Cephalic Hypoplasia

Undeveloped Cerebrum

Undeveloped Brain

Micrencephalon

Micrencephaly

Thalassemia

Sickle-Cell Thalassemia With Crisis

Sickle-Cell Thalassemia Without Crisis

Thalassemia Hb-S Disease With Crisis

Thalassemia Hb-S Disease Without Crisis

Thalassemias

Hereditary Leptocytosis

Haemoglobin Thalassaemia Disorder

Thalassaemia Syndrome

Thalassaemia Nos

Thalassemia Variants

Beta-Thalassemia

Beta Thalassemia

Cooley'S Anemia

Mediterranean Anemia

Beta Thalassemia Intermedia

Erythroblastic Anemia

Thalassemia, Hispanic Gamma-Delta-Beta

Thalassemia Major

Thalassemia Minor

Beta-Plus-Thalassemia

Thalassemia, Beta

Beta Thalassemia Major

Beta Thalassemia Minor

Thalassemias, Beta-

Microcytemia, Beta Type

Thalassemia, Beta Type

B-THAL

Mediterranean Anaemia

Beta Thalassaemia Syndrome

Mediterranean Disease

Beta Thalassaemia Disease

Blood Protein Disease

Blood Protein Disorders

Blood Protein Disorder

Chromosome 2p16.1-P15 Deletion Syndrome

2p15p16.1 Microdeletion Syndrome

2p15-P16.1 Microdeletion Syndrome

Del(2)(P15p16.1)

Monosomy 2p15p16.1

Monosomy 2p15-P16.1

Beta-Thalassemia Major

Cooley'S Anemia

Cooley Anemia

Mediterranean Anemia

Congenital Hemolytic Anemia

Anemia Hemolytic Congenital

Anemia, Hemolytic, Congenital

Congenital Hemolytic Anaemia

Hereditary Hemolytic Anaemia

Hereditary Hemolytic Anemia

Peroxisome Biogenesis Disorder 11a

PBD11A

Peroxisome Biogenesis Disorder Complementation Group 13

PBD-CG13

Cg13

Pbd-Cgh

Peroxisome Biogenesis Disorder Complementation Group H

Peroxisome Biogenesis Disorder, Type 11a

Peroxisome Biogenesis Disorder, Complementation Group 13

Fetal Hemoglobin Quantitative Trait Locus 1

Hereditary Persistence Of Fetal Hemoglobin

Delta-Beta-Thalassemia

Delta-Beta Thalassemia

Delta Beta-Thalassemia

HBFQTL1

Hemoglobin F, Hereditary Persistence Of

Hpfh

Hereditary Persistence Of Fetal Hemoglobin, Hb Gene Cluster-Related

Hemoglobin, Fetal, Quantitative Trait Locus 1

Hereditary Persistence Of Fetal Hemoglobin Thalassemia

Hpfh - [Hereditary Persistence Of Fetal Haemoglobin]

Fetal Haemoglobin

Persistence Of Fetal Haemoglobin

Persistent Haemoglobin F

Beta-Thalassemia Intermedia
Hemoglobinopathy

Hemoglobinopathies

Mediastinal Gray Zone Lymphoma

Mediastinal B-Cell Lymphoma, Unclassifiable, With Features Intermediate Between Diffuse Large B-Cell Lymphoma And Classical Hodgkin Lymphoma

Mediastinal Malignant Lymphoma

Lymphoma Of Mediastinum

Mediastinal Lymphoma

Hemoglobin E Disease

Hemoglobin E

Hb-E Disease

Anemia, Congenital Dyserythropoietic, Type Iv

CDAN4

Congenital Dyserythropoietic Anemia Type Iv

Congenital Dyserythropoietic Anemia Type 4

Cda Iv

Cda Due To Klf1 Mutation

Cda Type 4

Cda Type Iv

Congenital Dyserythropoietic Anemia Due To Klf1 Mutation

Cda, Type Iv

Dyserythropoietic Anemia, Congenital, Type Iv

Congenital Dyserythropoietic Anaemia Due To Klf1 Mutation

Congenital Dyserythropoietic Anaemia Type 4

Congenital Dyserythropoietic Anaemia Type Iv

Anemia, Congenital Dyserythropoietic, 4

Anemia, Dyserythropoietic Congenital, Type Iv

Anemia, Dyserythropoietic, Congenital, Type Iv

Acute Chest Syndrome

Acute Chest Syndrome In Sickle Cell Disease

Hemoglobin C Disease

Hb C Disease

Hemoglobin C

Hb-C Disease

Priapism

Mentulagra

Priapism, Familial Idiopathic

Familial Idiopathic Priapism

Pathologic Erection

Painful Erection

Prion Disease

Spongiform Encephalopathy

Transmissible Spongiform Encephalopathies

Prion Diseases

Prion Disease Pathway

Transmissible Spongiform Encephalopathy

Prion Induced Disorder

Prion Protein Disease

Inherited Human Transmissible Spongiform Encephalopathies

Prion Protein Diseases

Prion-Associated Disorders

Prion-Induced Disorders

Transmissible Dementias

Tses

Human Prion Disease

Tse

Encephalopathy, Transmissible Spongiform

Prion Disease, Susceptibility To

Spongiform Encephalopathies

Human Transmissible Spongiform Encephalopathies, Inherited

Alpha-Thalassemia

Alpha Thalassemia

Alpha Thalassaemia

Alpha Plus Thalassemia

Thalassemia, Alpha-

Thalassemias, Alpha-

A-Thalassemia

Α-Thalassemia

A-THAL

Thalassemia

Alpha Thalassaemia Syndrome

Autosomal Dominant Beta Thalassemia

Inclusion Body Beta-Thalassemia

Penile Disease

Penile Diseases

Patau Syndrome

Trisomy 13

Complete Trisomy 13 Syndrome

Trisomy 13 Syndrome

D1 Trisomy

Patau'S Syndrome

Complete Trisomy 13

Chromosome 13, Trisomy 13 Complete

D Trisomy Syndrome

Bartholin-Patau Syndrome

Chromosome 13 Duplication

D1 Trisomy Syndrome

D>1< Trisomy Syndrome

Patau

Chromosome 13 Trisomy

Abnormal Autosomes 13

Granulomatous Disease, Chronic, X-Linked

CGDX

Chronic Granulomatous Disease, X-Linked

X-Linked Chronic Granulomatous Disease

Cgd

Cytochrome B-Negative Granulomatous Disease, Chronic, X-Linked

Cdgx

X-Linked Chronic Cytochrome B-Negative Granulomatous Disease

Chronic Granulomatous Disease Cytochrome B-Negative X-Linked

Chronic Granulomatous Disease Cytochrome B-Positive X-Linked

Granulomatous Disease, Chronic, X-Linked, Variant

Hemolytic Anemia

Anemia, Hemolytic

Anemia Hemolytic

Anaemia Due To Other Disorders Of Glutathione Metabolism

Chronic Non Spherocytic Anaemia

G6pd - [Glucose-6-Phosphate Dehydrogenase Deficiency] Anaemia

Anaemia Due To Glucose-6-Phosphate Dehydrogenase Deficiency

Glucose-6-Phosphate Dehydrogenase Deficiency With Anaemia

Glucose-6-Phosphate Dehydrogenase Deficiency Anaemia

Favism Anaemia

Haemolytic Anaemia Due Tog6pd Deficiency

Favism

Pentose Phosphate Pathway Disorder Anaemia

Anaemia Due To Pentose Phosphate Pathway Defect

Strabismus

Strabismus, Susceptibility To

Strabismus, Susceptibility To, 1

Strabismus 1

Hemoglobin H Disease

HBH

Hemoglobin H Disease, Nondeletional

Hemoglobin H Disease, Deletional

Alpha-Thalassemia Intermedia

Haemoglobin H Disease

Alpha-Thalassemia, Hemoglobin H Type

Hemoglobin H Disease, Deletional And Nondeletional

Alpha Thalassemia, Haemoglobin H Type

Alpha Thalassemia, Hemoglobin H Type

Haemoglobin H Disease, Deletional

Hbh Disease

Alpha-Thalassemia Hemoglobin H Type

Hemoglobin H Disease Deletional

Hemoglobin H Disease Non-Deletional

Alpha-Thalassemia

Alpha - /- - Or Mutational Forms Of Alpha-Thalassaemia

Alpha Thalassaemia Intermedia

Autism

Autistic Disorder

Autism Susceptibility 1

Childhood Autism

Autistic Disorder Of Childhood Onset

Infantile Autism

Kanner'S Syndrome

Autistic

Deficiency Anemia

Anemia

Deficiency Anemias

Anaemia

Leber Plus Disease

Leber Congenital Amaurosis

Lca

Leber'S Amaurosis

Leber'S Disease

Amaurosis Congenita Of Leber

Amaurosis Congenita Of Leber, Type 1

Lhon Plus Disease

Congenital Absence Of The Rods And Cones

Congenital Retinal Blindness

Crb

Congenital Amaurosis Of Retinal Origin

Leber'S Congenital Amaurosis

Leber Congenital Amaurosis 1

Leber'S Congenital Tapetoretinal Degeneration

Leber'S Congenital Tapetoretinal Dysplasia

Lca1

Leber Congenital Amaurosis Type 1

Retinal Blindness, Congenital

Amaurosis, Leber Congenital

Dysgenesis Neuroepithelialis Retinae

Hereditary Epithelial Dysplasia Of Retina

Hereditary Retinal Aplasia

Heredoretinopathia Congenitalis

Leber Abiotrophy

Leber Congenital Tapetoretinal Degeneration

Lebers Congenital Amaurosis

Optic Atrophy, Hereditary, Leber

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Canis familiaris BCL11A VGNC VGNC:58661
Rattus norvegicus BCL11A RGD RGD:1309923
Felis catus BCL11A VGNC VGNC:60083
Bos taurus BCL11A VGNC VGNC:59205
Macaca mulatta BCL11A VGNC VGNC:70055
Mus musculus BCL11A MGD MGI:106190