SPG11 - SPG11 vesicle trafficking associated, spatacsin Gene
Also Known as ALS5; CMT2X; KIAA1840
Species: Homo sapiens
About SPG11
This gene has 41 transcripts (splice variants), 196 orthologues and is associated with 7 phenotypes. Ubiquitous expression in thyroid (RPKM 18.4), testis (RPKM 13.2) and 25 other tissues.
Summary
The protein encoded by this gene is a potential transmembrane protein that is phosphorylated upon DNA damage. Defects in this gene are a cause of spastic paraplegia type 11 (SPG11). Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2009]
SPG11 Products (3)
| mRNA | Protein | Name |
|---|---|---|
| NM_001160227.2 | NP_001153699.1 | spatacsin isoform 2 |
| NM_001411132.1 | NP_001398061.1 | spatacsin isoform 3 |
| NM_025137.4 | NP_079413.3 | spatacsin isoform 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
20613862 | GOA |
| enables protein kinase binding |
IDA
IDA: Inferred from direct assay
|
25365221 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| acts upstream of or within autophagosome organization |
IDA
IDA: Inferred from direct assay
|
25365221 | GOA |
| involved in axo-dendritic transport |
IMP
IMP: Inferred from mutant phenotype
|
24794856 | GOA |
| involved in chemical synaptic transmission |
IMP
IMP: Inferred from mutant phenotype
|
24794856 | GOA |
| acts upstream of or within lysosome organization |
IDA
IDA: Inferred from direct assay
|
25365221 | GOA |
| involved in synaptic vesicle transport |
IMP
IMP: Inferred from mutant phenotype
|
24794856 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
21545838 | GOA |
| located in cytoplasmic vesicle |
IDA
IDA: Inferred from direct assay
|
21545838 | GOA |
| located in synapse |
IDA
IDA: Inferred from direct assay
|
24794856 | GOA |
SPG11 Protein Structure
Spatacsin_C: Spatacsin C-terminus (2094 - 2388)
- 0
- 400
- 800
- 1200
- 1600
- 2000
- 2443 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
spatacsin |
|
SPG11 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
SPG11 | Q96JI7 | YWHAH | Homo sapiens | Q04917 | 36096339 | |
|
Intra
|
SPG11 | Q96JI7 | YWHAZ | Homo sapiens | P63104 | 36096339 | |
|
Intra
|
SPG11 | Q96JI7 | YWHAE | Homo sapiens | P62258 | 36096339 | |
|
Intra
|
SPG11 | Q96JI7 | YWHAB | Homo sapiens | P31946 | 36096339 | |
|
Intra
|
SPG11 | Q96JI7 | YWHAG | Homo sapiens | P61981 | 36096339 | |
|
Intra
|
SPG11 | Q96JI7 | YWHAQ | Homo sapiens | P27348 | 36096339 | |
|
Intra
|
SPG11 | Q96JI7 | DNM1 | Homo sapiens | Q05193 | 37871017 | |
|
Intra
|
SPG11 | Q96JI7 | SERTAD3 | Homo sapiens | Q9UJW9 | 25416956 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Spastic Paraplegia 11, Autosomal Recessive |
|
|
| Charcot-Marie-Tooth Disease, Axonal, Type 2x |
|
|
| Amyotrophic Lateral Sclerosis 5, Juvenile |
|
|
| Amyotrophic Lateral Sclerosis Type 5 |
|
|
| Spastic Paraplegia 11 |
|
|
| Homocarnosinosis |
|
|
| Hereditary Spastic Paraplegia |
|
|
| Juvenile Amyotrophic Lateral Sclerosis |
|
|
| Paraplegia |
|
|
| Spastic Paraparesis |
|
|
| Lateral Sclerosis |
|
|
| Spastic Paraplegia 15, Autosomal Recessive |
|
|
| Hereditary Spastic Paraplegia 35 |
|
|
| Spastic Paraplegia 78, Autosomal Recessive |
|
|
| Spastic Paraplegia 26, Autosomal Recessive |
|
|
| Spastic Paraplegia 54, Autosomal Recessive |
|
|
| Spastic Paraplegia 79, Autosomal Recessive |
|
|
| Spastic Paraplegia 77, Autosomal Recessive |
|
|
| Spastic Paraplegia 18, Autosomal Recessive |
|
|
| Spastic Paraplegia 48, Autosomal Recessive |
|
|
| Hereditary Spastic Paraplegia 49 |
|
|
| Spastic Paraplegia 3, Autosomal Dominant |
|
|
| Spastic Paraplegia 63, Autosomal Recessive |
|
|
| Spastic Paraplegia 43, Autosomal Recessive |
|
|
| Spastic Paraplegia 64, Autosomal Recessive |
|
|
| Spastic Paraplegia 44, Autosomal Recessive |
|
|
| Spastic Paraplegia 55, Autosomal Recessive |
|
|
| Masa Syndrome |
|
|
| Neuropathy, Hereditary Sensory, Type Iic |
|
|
| Spinal Muscular Atrophy, Distal, Autosomal Recessive, 4 |
|
|
| Charcot-Marie-Tooth Disease |
|
|
| Spastic Paraplegia 57, Autosomal Recessive |
|
|
| Motor Peripheral Neuropathy |
|
|
| Hereditary Spastic Paraplegia 30 |
|
|
| Spastic Paraplegia 2, X-Linked |
|
|
| Spastic Paraplegia 14, Autosomal Recessive |
|
|
| Spastic Paraplegia 45, Autosomal Recessive |
|
|
| Spastic Paraplegia 9b, Autosomal Recessive |
|
|
| Spastic Paraplegia 31, Autosomal Dominant |
|
|
| Spastic Paraplegia 52, Autosomal Recessive |
|
|
| Mast Syndrome |
|
|
| Tooth Disease |
|
|
| Charcot-Marie-Tooth Disease, Axonal, Type 2e |
|
|
| Spastic Paraplegia 10, Autosomal Dominant |
|
|
| Parkinson Disease 15, Autosomal Recessive Early-Onset |
|
|
| Amyotrophic Lateral Sclerosis 16, Juvenile |
|
|
| Spastic Paraplegia 42, Autosomal Dominant |
|
|
| Spinocerebellar Ataxia 2 |
|
|
| Neuronopathy, Distal Hereditary Motor, Type Va |
|
|
| Gm1-Gangliosidosis, Type Iii |
|
|
| Spastic Paraplegia 9a, Autosomal Dominant |
|
|
| Amyotrophic Lateral Sclerosis Type 6 |
|
|
| Hereditary Spastic Paraplegia 23 |
|
|
| Spastic Paraplegia 80, Autosomal Dominant |
|
|
| Spastic Paraplegia 53, Autosomal Recessive |
|
|
| Spastic Paraplegia 73, Autosomal Dominant |
|
|
| Spastic Paraplegia 62, Autosomal Recessive |
|
|
| Spastic Paraplegia 13, Autosomal Dominant |
|
|
| Spastic Paraplegia 8, Autosomal Dominant |
|
|
| Amyotrophic Lateral Sclerosis Type 15 |
|
|
| Nescav Syndrome |
|
|
| Spastic Paraplegia 50, Autosomal Recessive |
|
|
| Spastic Paraplegia 61, Autosomal Recessive |
|
|
| 3-Methylcrotonyl-Coa Carboxylase 2 Deficiency |
|
|
| Spastic Paraplegia 34, X-Linked |
|
|
| Pontocerebellar Hypoplasia, Type 2e |
|
|
| Charcot-Marie-Tooth Disease, Axonal, Type 2t |
|
|
| Amyotrophic Lateral Sclerosis 4, Juvenile |
|
|
| Kufor-Rakeb Syndrome |
|
|
| Amyotrophic Lateral Sclerosis 10 With Or Without Frontotemporal Dementia |
|
|
| Spastic Paraplegia 7, Autosomal Recessive |
|
|
| Cerebrotendinous Xanthomatosis |
|
|
| Neurodegeneration With Brain Iron Accumulation 5 |
|
|
| Amyotrophic Lateral Sclerosis Type 12 |
|
|
| Neuropathy, Congenital Hypomyelinating, 1, Autosomal Recessive |
|
|
| Amyotrophic Lateral Sclerosis 8 |
|
|
| Spastic Paraplegia 17, Autosomal Dominant |
|
|
| Frontotemporal Dementia And/Or Amyotrophic Lateral Sclerosis 1 |
|
|
| Retinal Degeneration |
|
|
| Hemochromatosis, Type 1 |
|
|
| Spastic Ataxia |
|
|
| Neurodegeneration With Brain Iron Accumulation |
|
|
| Movement Disease |
|
|
| Cerebellar Disease |
|
|
| Hypomyelinating Leukodystrophy |
|
|
| Neuronal Ceroid Lipofuscinosis |
|
|
| Parkinson Disease, Late-Onset |
|
|
| Autosomal Dominant Cerebellar Ataxia |
|
|
| Neuromuscular Disease |
|
|
| Amyotrophic Lateral Sclerosis 1 |
|
|
| Peripheral Nervous System Disease |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Bos taurus | SPG11 | VGNC | VGNC:35207 |
| Macaca mulatta | SPG11 | VGNC | VGNC:77856 |
| Canis familiaris | SPG11 | VGNC | VGNC:46734 |
| Mus musculus | SPG11 | MGD | MGI:2444989 |
| Rattus norvegicus | SPG11 | RGD | RGD:1562529 |
| Felis catus | SPG11 | VGNC | VGNC:65633 |
| Others | SPG11 | NCBI |