CHK1 Inhibitor Blocks Phosphorylation of FAM122A and Promotes Replication Stress

  • Mol Cell. 2020 Nov 5;80(3):410-422.e6. doi: 10.1016/j.molcel.2020.10.008.
Feng Li  1 David Kozono  1 Peter Deraska  2 Timothy Branigan  3 Connor Dunn  2 Xiao-Feng Zheng  1 Kalindi Parmar  2 Huy Nguyen  2 James DeCaprio  3 Geoffrey I Shapiro  4 Dipanjan Chowdhury  1 Alan D D'Andrea  5
Affiliations
  • 1. Department of Radiation Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
  • 2. Department of Radiation Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Center for DNA Damage and Repair, Dana-Farber Cancer Institute, Boston, MA 02215, USA.
  • 3. Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 01115.
  • 4. Center for DNA Damage and Repair, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 01115; Early Drug Development Center, Dana-Farber Cancer Institute, Boston, MA 02215.
  • 5. Department of Radiation Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA; Center for DNA Damage and Repair, Dana-Farber Cancer Institute, Boston, MA 02215, USA. Electronic address: [email protected].
Abstract

While effective anti-cancer drugs targeting the Chk1 kinase are advancing in the clinic, drug resistance is rapidly emerging. Here, we demonstrate that CRISPR-mediated knockout of the little-known gene FAM122A/PABIR1 confers cellular resistance to Chk1 inhibitors (CHK1is) and cross-resistance to ATR inhibitors. Knockout of FAM122A results in activation of PP2A-B55α, a Phosphatase that dephosphorylates the Wee1 protein and rescues Wee1 from ubiquitin-mediated degradation. The resulting increase in Wee1 protein expression reduces replication stress, activates the G2/M checkpoint, and confers cellular resistance to CHK1is. Interestingly, in tumor cells with oncogene-driven replication stress, Chk1 can directly phosphorylate FAM122A, leading to activation of the PP2A-B55α Phosphatase and increased Wee1 expression. A combination of a CHK1i plus a Wee1 Inhibitor can overcome CHK1i resistance of these tumor cells, thereby enhancing anti-cancer activity. The FAM122A expression level in a tumor cell can serve as a useful biomarker for predicting CHK1i sensitivity or resistance.

Keywords
CHK1 inhibitor; CRISPR sgRNA screening; FAM122A; Fanconi Anemia; PABIR1; PP2A; WEE1.