Self-amplifying NRF2-EZH2 epigenetic loop converts KRAS-initiated progenitors to invasive pancreatic cancer

  • Nat Cancer. 2025 Jul;6(7):1263-1282. doi: 10.1038/s43018-025-01003-3.
Laura Antonucci  1 Na Li  2 Angeles Duran  3 Isidoro Cobo  4  5  6 Chiara Nicoletti  7 Kosuke Watari  1 Shuvro Prokash Nandi  4  8 Feng Zhu  9 Yongmei Zhao  10 Irene Riahi  11 Motoyuki Tsuda  12 Vidhi M Shah  12  13 Terry Morgan  14 Trent Waugh  13 Luca Caputo  7 Yuan Liu  1 Alexandra Rundberg Nilsson  1 Hongxu Xian  1 Jelena Todoric  1  15 Li Gu  1 Elsa Sanchez-Lopez  16 Guido Eibl  17 Emily A Vucic  18 Michal Krawczyk  19 Qianlan Xu  19 Andrew M Lowy  20 Georgia Hatzivassiliou  21 Merone Roose-Girma  21 Dorota Skowronska-Krawczyk  19 David A Scott  22 Dafna Bar-Sagi  18 Pablo Tamayo  23 Ying Wu  10 Rosalie C Sears  12  13  24 Christopher K Glass  4 Ludmil B Alexandrov  4  8  25 Pier Lorenzo Puri  7 David W Dawson  11 Yinling Hu  9 Maria T Diaz-Meco  3 Jorge Moscat  3 Michael Karin  26
Affiliations
  • 1. Laboratory of Gene Regulation and Signal Transduction, Departments of Pharmacology and Pathology, University of California, San Diego School of Medicine, La Jolla, CA, USA.
  • 2. Department of Radiation Oncology, Shandong Cancer Hospital and Institute, Shandong First Medical University, Jinan, China.
  • 3. Department of Pathology and Laboratory Medicine and Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, New York, NY, USA.
  • 4. Department of Cellular & Molecular Medicine, University of California, San Diego School of Medicine, La Jolla, CA, USA.
  • 5. Division of Clinical Immunology & Rheumatology, Department of Medicine, Heersink School of Medicine, University of Alabama at Birmingham, Birmingham, AL, USA.
  • 6. Comprehensive Arthritis, Musculoskeletal, Bone and Autoimmunity Center, University of Alabama at Birmingham, Birmingham, AL, USA.
  • 7. Development, Aging and Regeneration Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
  • 8. Moores Cancer Center, University of California, San Diego School of Medicine, La Jolla, CA, USA.
  • 9. Cancer Innovation Laboratory, Center for Cancer Research, National Cancer Institute, Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
  • 10. CCR Sequencing Facility Bioinformatics Group, Bioinformatics and Computational Science Directorate, Frederick National Laboratory for Cancer Research, Frederick, MD, USA.
  • 11. Departments of Pathology and Laboratory Medicine, Jonsson Comprehensive Cancer Center, David Geffen School of Medicine at University of California, Los Angeles, Los Angeles, CA, USA.
  • 12. Department of Molecular and Medical Genetics, School of Medicine Oregon Health and Science University, Portland, OR, USA.
  • 13. Brenden-Colson Center for Pancreatic Care, School of Medicine Oregon Health and Science University, Portland, OR, USA.
  • 14. Department of Pathology, School of Medicine Oregon Health and Science University, Portland, OR, USA.
  • 15. Department of Laboratory Medicine, Medical University of Vienna, Vienna, Austria.
  • 16. Department of Orthopedic Surgery, University of California, San Diego School of Medicine, La Jolla, CA, USA.
  • 17. Department of Surgery, University of California, Los Angeles, Los Angeles, CA, USA.
  • 18. Department of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY, USA.
  • 19. Department of Physiology and Biophysics, Center for Translational Vision Research, School of Medicine, University of California, Irvine, Irvine, CA, USA.
  • 20. Department of Surgery, Division of Surgical Oncology, Moores Cancer Center, University of California, San Diego School of Medicine, La Jolla, CA, USA.
  • 21. Genentech, Inc., San Francisco, CA, USA.
  • 22. Cancer Metabolism Core, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, USA.
  • 23. Center for Novel Therapeutics and Division of Medical Genetics, Department of Medicine, Moores Cancer Center, University of California, San Diego School of Medicine, La Jolla, CA, USA.
  • 24. Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA.
  • 25. Department of Bioengineering, University of California, San Diego, La Jolla, CA, USA.
  • 26. Laboratory of Gene Regulation and Signal Transduction, Departments of Pharmacology and Pathology, University of California, San Diego School of Medicine, La Jolla, CA, USA. [email protected].
Abstract

Pancreatic ductal adenocarcinoma (PDAC) emerges from mutant KRAS-harboring but dormant low-grade pancreatic intraepithelial neoplasia (PanIN). To examine the role of oxidative stress, a putative PDAC risk factor, we established an organoid-based transformation system. Although the prototypic oxidant H2O2 induced Organoid transformation, its effect was nonmutational and was mediated by the oxidant-responsive transcription factor NRF2, which induced the Histone Methyltransferase EZH2. Congruently, nonoxidizing NRF2 activators triggered Organoid malignant conversion through NRF2 and EZH2, establishing a hitherto unknown epigenetic mechanism underlying PanIN-to-PDAC progression. While NRF2 induced EZH2 gene transcription in mouse and human PDAC, EZH2, a general repressor, coactivated transcription of NRF2-encoding NFE2L2 and interacted with Other transcription factors to induce genes that sustain PDAC metabolic demands. The self-amplifying NRF2-EZH2 epigenetic loop also accounted for inflammation-driven PanIN-to-PDAC progression in vivo and was upregulated in established human PDAC, whose malignancy was maintained by NRF2 binding to the EZH2 promoter.

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