Comprehensive In Vitro Metabolic Characterization of Eudesmin in Human and Mouse Hepatocytes

  • Pharmaceutics. 2026 Mar 31;18(4):432. doi: 10.3390/pharmaceutics18040432.
Min Seo Lee  1 Ju-Hyun Kim  2 Im-Sook Song  3 Yong-Yeon Cho  1 Joo Young Lee  1 Hye Suk Lee  1
Affiliations
  • 1. College of Pharmacy, The Catholic University of Korea, Bucheon 14662, Republic of Korea.
  • 2. College of Pharmacy, Yeungnam University, Gyeongsan 38541, Republic of Korea.
  • 3. BK21 FOUR Community-Based Intelligent Novel Drug Discovery Education Unit, Vessel-Organ Interaction Research Center (VOICE), Research Institute of Pharmaceutical Sciences, College of Pharmacy, Kyungpook National University, Daegu 41566, Republic of Korea.
Abstract

Background/Objectives: Eudesmin is a tetrahydrofurofuranoid lignan known for its diverse pharmacological activities, including anti-tumor, anti-inflammatory, and neuroprotective effects. However, its metabolism has not been well characterized. Methods: This study examined the in vitro metabolism of eudesmin using human and mouse hepatocytes, human liver microsomes, and recombinant drug-metabolizing Enzymes. Liquid chromatography-high-resolution mass spectrometry combined with ion identity molecular networking enabled the comprehensive visualization and annotation of eudesmin metabolites. Results: Eudesmin exhibited moderate metabolic stability in human and mouse hepatocytes, with half-lives of 181.0 min and 132.9 min, and intrinsic clearance values of 27.7 mL/min/kg and 154.0 mL/min/kg, respectively. Incubation of eudesmin with human hepatocytes resulted in the formation of 13 metabolites, including five phase I metabolites (M1-M5) and eight phase II conjugates. Phase I metabolism was dominated by O-demethylation of the 3,4-dimethoxyphenyl moieties, yielding mono-O-demethylated (M1 and M2) and di-O-demethylated metabolites (M3 and M4), as well as a hydroxylated metabolite (M5). Enzyme phenotyping, kinetic analyses, and chemical inhibition experiments identified Cytochrome P450 2C9 (CYP2C9) as the major contributor to O-demethylation, with additional contributions from CYP2C19, CYP2C8, CYP3A4, and CYP3A5, whereas hydroxylation was mediated primarily by CYP3A4 and CYP3A5. The O-demethylated metabolites subsequently underwent phase II metabolism, forming glucuronide conjugates of M1-M4 and sulfate conjugates of M1-M3, including a disulfate of M3. Uridine 5'-diphospho-glucuronosyltransferase and sulfotransferase screening revealed the involvement of multiple conjugative Enzymes, indicating extensive and distributed phase II metabolism. Specifically, di-O-demethylated metabolites and their conjugates were detected in human hepatocytes but not in mouse hepatocytes, suggesting that the sequential O-demethylation pathway is limited in mice. Conclusions: This study characterizes eudesmin metabolism, with CYP2C9-mediated O-demethylation and significant species differences between humans and mice, and provides a basis for its further pharmaceutical development.

Keywords
drug-metabolizing enzymes; eudesmin; hepatocytes; ion identity molecular networking; metabolite identification.
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