PSMD1 - proteasome 26S subunit, non-ATPase 1 Gene
Also Known as S1; P112; Rpn2
Species: Homo sapiens
About PSMD1
This gene has 37 transcripts (splice variants), 212 orthologues and 1 paralogue. Ubiquitous expression in brain (RPKM 24.7), appendix (RPKM 17.2) and 25 other tissues.
Summary
The 26S Proteasome is a multicatalytic proteinase complex with a highly ordered structure composed of 2 complexes, a 20S core and a 19S regulator. The 20S core is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. The 19S regulator is composed of a base, which contains 6 ATPase subunits and 2 non-ATPase subunits, and a lid, which contains up to 10 non-ATPase subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. An essential function of a modified Proteasome, the immunoproteasome, is the processing of class I MHC peptides. This gene encodes the largest non-ATPase subunit of the 19S regulator lid, which is responsible for substrate recognition and binding. There is evidence that this Proteasome and its subunits interact with Viral Proteins, including those of coronaviruses. Alternatively spliced transcript variants have been found for this gene.[provided by RefSeq, Aug 2020]
PSMD1 Products (2)
| mRNA | Protein | Name |
|---|---|---|
| NM_001191037.2 | NP_001177966.1 | 26S proteasome non-ATPase regulatory subunit 1 isoform 2 |
| NM_002807.4 | NP_002798.2 | 26S proteasome non-ATPase regulatory subunit 1 isoform 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
16990800 | GOA |
| enables ubiquitin protein ligase binding |
IPI
IPI: Inferred from physical interaction
|
16207813 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| part of proteasome complex |
IDA
IDA: Inferred from direct assay
|
17323924 | GOA |
PSMD1 Protein Structure
PC_rep: Proteasome/cyclosome repeat (404 - 433)
PC_rep: Proteasome/cyclosome repeat (441 - 473)
PC_rep: Proteasome/cyclosome repeat (476 - 507)
PC_rep: Proteasome/cyclosome repeat (511 - 543)
HEAT_2: HEAT repeats (602 - 690)
- 0
- 200
- 400
- 600
- 800
- 953 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
26S proteasome non-ATPase regulatory subunit 1 |
|
PSMD1 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
PSMD1 | Q99460 | PSMD4 | Homo sapiens | P55036 | 35271311 | |
|
Intra
|
PSMD1 | Q99460 | ADRM1 | Homo sapiens | Q16186 | 16990800 | |
|
Intra
|
PSMD1 | Q99460 | ADRM1 | Homo sapiens | Q16186 | 31064842 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Cystic Fibrosis |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Rattus norvegicus | PSMD1 | RGD | RGD:621669 |
| Mus musculus | PSMD1 | MGD | MGI:1917497 |
| Bos taurus | PSMD1 | VGNC | VGNC:33461 |
| Macaca mulatta | PSMD1 | VGNC | VGNC:76449 |
| Canis familiaris | PSMD1 | VGNC | VGNC:45105 |
| Felis catus | PSMD1 | VGNC | VGNC:69118 |
| Others | PSMD1 | NCBI |