DDX19B - DEAD-box helicase 19B Gene
Also Known as DBP5; RNAh; DDX19
Species: Homo sapiens
About DDX19B
This gene has 16 transcripts (splice variants), 269 orthologues and 38 paralogues. Ubiquitous expression in testis (RPKM 16.5), thyroid (RPKM 10.7) and 25 other tissues.
Summary
DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene encodes a DEAD box protein, which exhibits RNA-dependent ATPase and ATP-dependent RNA-unwinding activities. This protein is recruited to the cytoplasmic fibrils of the nuclear pore complex, where it participates in the export of mRNA from the nucleus. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
DDX19B Products (8)
| mRNA | Protein | Name |
|---|---|---|
| NM_001014449.3 | NP_001014449.1 | ATP-dependent RNA helicase DDX19B isoform 3 |
| NM_001014451.3 | NP_001014451.1 | ATP-dependent RNA helicase DDX19B isoform 2 |
| NM_001257172.2 | NP_001244101.1 | ATP-dependent RNA helicase DDX19B isoform 4 |
| NM_001257173.2 | NP_001244102.1 | ATP-dependent RNA helicase DDX19B isoform 3 |
| NM_001257174.2 | NP_001244103.1 | ATP-dependent RNA helicase DDX19B isoform 3 |
| NM_001257175.2 | NP_001244104.1 | ATP-dependent RNA helicase DDX19B isoform 5 |
| NM_001363938.1 | NP_001350867.1 | ATP-dependent RNA helicase DDX19B isoform 6 |
| NM_007242.7 | NP_009173.1 | ATP-dependent RNA helicase DDX19B isoform 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
19208808 | GOA |
DDX19B Protein Structure
DEAD: DEAD/DEAH box helicase (117 - 281)
Helicase_C: Helicase conserved C-terminal domain (352 - 434)
- 0
- 100
- 200
- 300
- 400
- 479 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
ATP-dependent RNA helicase DDX19B |
|
DDX19B Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
DDX19B | Q9UMR2 | CTIF | Homo sapiens | O43310-2 | 32296183 | |
|
Intra
|
DDX19B | Q9UMR2 | CTIF | Homo sapiens | O43310-2 | 32296183 | |
|
Intra
|
DDX19B | Q9UMR2 | TGFBR2 | Homo sapiens | P37173 | 32814053 | |
|
Intra
|
DDX19B | Q9UMR2 | TGFBR2 | Homo sapiens | P37173 | 32814053 | |
|
Intra
|
DDX19B | Q9UMR2 | TGFBR2 | Homo sapiens | P37173 | 32814053 | |
|
Intra
|
DDX19B | Q9UMR2 | MIF4GD | Homo sapiens | A9UHW6 | 23804756 | |
|
Intra
|
DDX19B | Q9UMR2 | MIF4GD | Homo sapiens | A9UHW6 | 31515488 | |
|
Intra
|
DDX19B | Q9UMR2 | MIF4GD | Homo sapiens | A9UHW6 | 33961781 | |
|
Intra
|
DDX19B | Q9UMR2 | MIF4GD | Homo sapiens | A9UHW6 | 23804756 | |
|
Intra
|
DDX19B | Q9UMR2 | MIF4GD | Homo sapiens | A9UHW6 | 23804756 | |
|
Intra
|
DDX19B | Q9UMR2 | MIF4GD | Homo sapiens | A9UHW6 | 23804756 | |
|
Intra
|
DDX19B | Q9UMR2 | TERF1 | Homo sapiens | P54274 | 21044950 | |
|
Intra
|
DDX19B | Q9UMR2 | MIF4GD | Homo sapiens | A9UHW6-2 | 32296183 | |
|
Intra
|
DDX19B | Q9UMR2 | MIF4GD | Homo sapiens | A9UHW6-2 | 32296183 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Lethal Congenital Contracture Syndrome 1 |
|
|
| Anterior Horn Cell Disease |
|
|
| Lethal Congenital Contracture Syndrome |
|
|
| Spinocerebellar Ataxia, Autosomal Recessive, With Axonal Neuropathy 2 |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Mus musculus | DDX19B | MGD | MGI:2148251 |
| Rattus norvegicus | DDX19B | RGD | RGD:1593382 |
| Others | DDX19B | NCBI |