VARS1 - valyl-tRNA synthetase 1 Gene
Also Known as G7A; VARS; VARS2; NDMSCA
Species: Homo sapiens
About VARS1
This gene has 14 transcripts (splice variants), 1 gene allele, 200 orthologues, 7 paralogues and is associated with 2 phenotypes. Broad expression in testis (RPKM 30.0), appendix (RPKM 11.3) and 25 other tissues.
Summary
Aminoacyl-tRNA synthetases catalyze the aminoacylation of tRNA by their cognate amino acid. Because of their central role in linking Amino acids with nucleotide triplets contained in tRNAs, aminoacyl-tRNA synthetases are thought to be among the first proteins that appeared in evolution. The protein encoded by this gene belongs to class-I Aminoacyl-tRNA Synthetase family and is located in the class III region of the major histocompatibility complex. [provided by RefSeq, Jul 2008]
VARS1 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_006295.3 | NP_006286.1 | valine--tRNA ligase |
| Molecular Function GO Annotation | Evidence | Verweise | Source |
|---|---|---|---|
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
24965446 | GOA |
| enables valine-tRNA ligase activity |
IDA
IDA: Inferred from direct assay
|
8428657 | GOA |
VARS1 Protein Structure
GST_N: Glutathione S-transferase, N-terminal domain (2 - 81)
GST_C: Glutathione S-transferase, C-terminal domain (125 - 198)
tRNA-synt_1: tRNA synthetases class I (I, L, M and V) (309 - 939)
Anticodon_1: Anticodon-binding domain of tRNA (984 - 1131)
- 0
- 200
- 400
- 600
- 800
- 1000
- 1200
- 1264 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
valine--tRNA ligase |
|
VARS1 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | Verweise |
|---|---|---|---|---|---|---|---|
|
Intra
|
VARS1 | P26640 | CAMK2B | Homo sapiens | Q13554-3 | 32296183 | |
|
Intra
|
VARS1 | P26640 | CAMK2B | Homo sapiens | Q13554-3 | 32296183 | |
|
Intra
|
VARS1 | P26640 | CAMK2B | Homo sapiens | Q13554-3 | 32296183 | |
|
Intra
|
VARS1 | P26640 | CAMK2A | Homo sapiens | Q9UQM7 | 32296183 | |
|
Intra
|
VARS1 | P26640 | CAMK2A | Homo sapiens | Q9UQM7 | 32296183 | |
|
Intra
|
VARS1 | P26640 | CAMK2A | Homo sapiens | Q9UQM7 | 32296183 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Neurodevelopmental Disorder With Microcephaly, Seizures, And Cortical Atrophy |
|
|
| Combined Oxidative Phosphorylation Deficiency 20 |
|
|
| Combined Oxidative Phosphorylation Deficiency 2 |
|
|
| Pulmonary Embolism And Infarction |
|
|
| Combined Oxidative Phosphorylation Deficiency 23 |
|
|
| Combined Oxidative Phosphorylation Deficiency 24 |
|
|
| Charcot-Marie-Tooth Disease, Axonal, Type 2u |
|
|
| Microcephaly |
|
|
| Combined Oxidative Phosphorylation Deficiency 12 |
|
|
| Perrault Syndrome |
|
|
| Mitochondrial Complex I Deficiency, Nuclear Type 1 |
|
|
| Leigh Syndrome |
|
|
| Congenital Nervous System Abnormality |
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Mus musculus | VARS1 | MGD | MGI:90675 |
| Felis catus | VARS1 | VGNC | VGNC:66919 |
| Bos taurus | VARS1 | VGNC | VGNC:36765 |
| Rattus norvegicus | VARS1 | RGD | RGD:3950 |
| Macaca mulatta | VARS1 | VGNC | VGNC:78755 |
| Canis familiaris | VARS1 | VGNC | VGNC:48231 |
| Others | VARS1 | NCBI |