CEP290 - centrosomal protein 290 Gene
Also Known as CT87; MKS4; POC3; rd16; BBS14; JBTS5; LCA10; NPHP6; SLSN6; 3H11Ag
Species: Homo sapiens
About CEP290
This gene has 34 transcripts (splice variants), 230 orthologues and is associated with 11 phenotypes. Ubiquitous expression in testis (RPKM 5.0), thyroid (RPKM 3.8) and 25 other tissues.
Summary
This gene encodes a protein with 13 putative coiled-coil domains, a region with homology to SMC chromosome segregation ATPases, six KID motifs, three tropomyosin homology domains and an ATP/GTP binding site motif A. The protein is localized to the centrosome and cilia and has sites for N-glycosylation, tyrosine sulfation, phosphorylation, N-myristoylation, and amidation. Mutations in this gene have been associated with Joubert syndrome and nephronophthisis and the presence of antibodies against this protein is associated with several forms of Cancer. [provided by RefSeq, Jul 2008]
CEP290 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_025114.4 | NP_079390.3 | centrosomal protein of 290 kDa |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables identical protein binding |
IPI
IPI: Inferred from physical interaction
|
18723859 | GOA |
| NOT enables microtubule minus-end binding |
IDA
IDA: Inferred from direct assay
|
16682973 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
16682973 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in cilium assembly |
IDA
IDA: Inferred from direct assay
|
26386044 | GOA |
| involved in positive regulation of DNA-templated transcription |
IDA
IDA: Inferred from direct assay
|
16682973 | GOA |
| involved in positive regulation of intracellular protein transport |
IMP
IMP: Inferred from mutant phenotype
|
22797915 | GOA |
| acts upstream of or within regulation of establishment of protein localization |
IMP
IMP: Inferred from mutant phenotype
|
24421332 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in centriolar satellite |
IDA
IDA: Inferred from direct assay
|
22797915 | GOA |
| located in centriole |
IDA
IDA: Inferred from direct assay
|
27623382 | GOA |
| colocalizes with centrosome |
IDA
IDA: Inferred from direct assay
|
24648492 | GOA |
| located in centrosome |
IDA
IDA: Inferred from direct assay
|
14654843 | GOA |
| located in ciliary transition zone |
IDA
IDA: Inferred from direct assay
|
23943788 | GOA |
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
14654843 | GOA |
| located in cytosol |
IDA
IDA: Inferred from direct assay
|
16682973 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
16682973 | GOA |
| part of protein-containing complex |
IDA
IDA: Inferred from direct assay
|
24421332 | GOA |
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
centrosomal protein of 290 kDa |
|
CEP290 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
CEP290 | O15078 | CEP162 | Homo sapiens | Q5TB80 | 26638075 | |
|
Intra
|
CEP290 | O15078 | CEP162 | Homo sapiens | Q5TB80 | 26638075 | |
|
Intra
|
CEP290 | O15078 | CCP110 | Homo sapiens | O43303 | 22441691 | |
|
Intra
|
CEP290 | O15078 | CCP110 | Homo sapiens | O43303 | 18694559 | |
|
Intra
|
CEP290 | O15078 | CCP110 | Homo sapiens | O43303 | 18694559 | |
|
Intra
|
CEP290 | O15078 | CCP110 | Homo sapiens | O43303 | 21620453 | |
|
Intra
|
CEP290 | O15078 | CCP110 | Homo sapiens | O43303 | 24421332 | |
|
Intra
|
CEP290 | O15078 | CCP110 | Homo sapiens | O43303 | 26638075 | |
|
Intra
|
CEP290 | O15078 | CCP110 | Homo sapiens | O43303 | 26638075 | |
|
Intra
|
CEP290 | O15078 | IQCB1 | Homo sapiens | Q15051 | 23446637 | |
|
Intra
|
CEP290 | O15078 | IQCB1 | Homo sapiens | Q15051 | 23446637 | |
|
Intra
|
CEP290 | O15078 | IQCB1 | Homo sapiens | Q15051 | 26638075 | |
|
Intra
|
CEP290 | O15078 | IQCB1 | Homo sapiens | Q15051 | 23446637 | |
|
Intra
|
CEP290 | O15078 | IQCB1 | Homo sapiens | Q15051 | 26638075 | |
|
Intra
|
CEP290 | O15078 | CEP131 | Homo sapiens | Q9UPN4 | 24816561 | |
|
Intra
|
CEP290 | O15078 | CEP131 | Homo sapiens | Q9UPN4 | 26638075 | |
|
Intra
|
CEP290 | O15078 | CEP131 | Homo sapiens | Q9UPN4 | 26638075 | |
|
Intra
|
CEP290 | O15078 | KIAA1328 | Homo sapiens | Q86T90 | 32296183 | |
|
Intra
|
CEP290 | O15078 | KIAA1328 | Homo sapiens | Q86T90 | 32296183 | |
|
Intra
|
CEP290 | O15078 | KIAA1328 | Homo sapiens | Q86T90 | 32296183 | |
|
Intra
|
CEP290 | O15078 | BBLN | Homo sapiens | Q9BUW7 | 32296183 | |
|
Intra
|
CEP290 | O15078 | BBLN | Homo sapiens | Q9BUW7 | 25416956 | |
|
Intra
|
CEP290 | O15078 | BBLN | Homo sapiens | Q9BUW7 | 32296183 | |
|
Intra
|
CEP290 | O15078 | BBLN | Homo sapiens | Q9BUW7 | 25416956 | |
|
Intra
|
CEP290 | O15078 | BBLN | Homo sapiens | Q9BUW7 | 32296183 | |
|
Intra
|
CEP290 | O15078 | PICK1 | Homo sapiens | Q9NRD5 | 32296183 | |
|
Intra
|
CEP290 | O15078 | PICK1 | Homo sapiens | Q9NRD5 | 32296183 | |
|
Intra
|
CEP290 | O15078 | PICK1 | Homo sapiens | Q9NRD5 | 32296183 | |
|
Cross
|
CEP290 | O15078 | Calm1 | Rattus norvegicus | P0DP29 | 23446637 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Joubert Syndrome 5 |
|
|
| Senior-Loken Syndrome 6 |
|
|
| Bardet-Biedl Syndrome 14 |
|
|
| Leber Congenital Amaurosis 10 |
|
|
| Meckel Syndrome, Type 4 |
|
|
| Meckel Syndrome, Type 1 |
|
|
| Occipital Encephalocele |
|
|
| Encephalocele |
|
|
| Renal Dysplasia, Cystic |
|
|
| Night Blindness |
|
|
| Kidney Disease |
|
|
| Leber Plus Disease |
|
|
| Arima Syndrome |
|
|
| Meckel Syndrome, Type 6 |
|
|
| Juvenile Nephronophthisis |
|
|
| Nephronophthisis |
|
|
| Fundus Dystrophy |
|
|
| Polycystic Kidney Disease |
|
|
| Immunodeficiency 47 |
|
|
| Senior-Loken Syndrome 1 |
|
|
| Spastic Ataxia |
|
|
| Joubert Syndrome 1 |
|
|
| Nervous System Disease |
|
|
| Bardet-Biedl Syndrome |
|
|
| Congenital Nervous System Abnormality |
|
|
| Cone-Rod Dystrophy 2 |
|
|
| Retinitis Pigmentosa |
|
|
| Hypotonia |
|
|
| Polydactyly |
|
|
| Simpson-Golabi-Behmel Syndrome, Type 2 |
|
|
| Orofaciodigital Syndrome I |
|
|
| Retinoschisis 1, X-Linked, Juvenile |
|
|
| Leber Congenital Amaurosis 2 |
|
|
| Apraxia |
|
|
| Leber Congenital Amaurosis 4 |
|
|
| Joubert Syndrome 2 |
|
|
| Leber Congenital Amaurosis 6 |
|
|
| Joubert Syndrome 3 |
|
|
| Nephronophthisis 11 |
|
|
| Coach Syndrome 1 |
|
|
| Eye Disease |
|
|
| Nephronophthisis 9 |
|
|
| Retinal Degeneration |
|
|
| Usher Syndrome, Type Iia |
|
|
| Bardet-Biedl Syndrome 4 |
|
|
| Leber Congenital Amaurosis 3 |
|
|
| Retinitis Pigmentosa 39 |
|
|
| Pseudopapilledema |
|
|
| Orofaciodigital Syndrome |
|
|
| Renal-Hepatic-Pancreatic Dysplasia |
|
|
| Leber Congenital Amaurosis 8 |
|
|
| Eye Degenerative Disease |
|
|
| Bardet-Biedl Syndrome 11 |
|
|
| Nephronophthisis 19 |
|
|
| Choroid Disease |
|
|
| Nephronophthisis 2 |
|
|
| Mckusick-Kaufman Syndrome |
|
|
| Keratoconus |
|
|
| Retinitis Pigmentosa 2 |
|
|
| Hereditary Retinal Dystrophy |
|
|
| Cogan Syndrome |
|
|
| Nephronophthisis 16 |
|
|
| Stargardt Disease |
|
|
| Usher Syndrome Type 2 |
|
|
| Physical Disorder |
|
|
| Macular Degeneration, Age-Related, 1 |
|
|
| Choroideremia |
|
|
| Achromatopsia |
|
|
| Cranioectodermal Dysplasia |
|
|
| Joubert Syndrome 24 |
|
|
| Polycystic Kidney Disease 4 With Or Without Polycystic Liver Disease |
|
|
| Enophthalmos |
|
|
| Color Blindness |
|
|
| Coloboma Of Macula |
|
|
| Orofaciodigital Syndrome Vi |
|
|
| Cone Dystrophy |
|
|
| Usher Syndrome |
|
|
| Asphyxiating Thoracic Dystrophy |
|
|
| Late-Onset Retinal Degeneration |
|
|
| Cystic Kidney Disease |
|
|
| Heart Disease |
|
|
| Episodic Ataxia, Type 8 |
|
|
| Acrocallosal Syndrome |
|
|
| Visceral Heterotaxy |
|
|
| Refractive Error |
|
|
| Retinal Disease |
|
|
| Congenital Stationary Night Blindness |
|
|
| Vitelliform Macular Dystrophy |
|
|
| Ellis-Van Creveld Syndrome |
|
|
| Situs Inversus |
|
|
| Short-Rib Thoracic Dysplasia 1 With Or Without Polydactyly |
|
|
| Exudative Vitreoretinopathy |
|
|
| Autosomal Dominant Polycystic Kidney Disease |
|
|
| Usher Syndrome, Type I |
|
|
| Primary Ciliary Dyskinesia |
|
|
| Neuronal Ceroid Lipofuscinosis |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Felis catus | CEP290 | VGNC | VGNC:60771 |
| Canis familiaris | CEP290 | VGNC | VGNC:39125 |
| Bos taurus | CEP290 | VGNC | VGNC:27201 |
| Rattus norvegicus | CEP290 | RGD | RGD:1311640 |
| Macaca mulatta | CEP290 | VGNC | VGNC:71126 |
| Mus musculus | CEP290 | MGD | MGI:2384917 |
| Others | CEP290 | NCBI |