RTN4IP1 - reticulon 4 interacting protein 1 Gene
Also Known as NIMP; OPA10
Species: Homo sapiens
About RTN4IP1
This gene has 4 transcripts (splice variants), 270 orthologues, 17 paralogues and is associated with 4 phenotypes. Ubiquitous expression in skin (RPKM 10.5), placenta (RPKM 7.8) and 24 other tissues.
Summary
This gene encodes a mitochondrial protein that interacts with reticulon 4, which is a potent inhibitor of regeneration following spinal cord injury. This interaction may be important for reticulon-induced inhibition of neurite growth. Mutations in this gene can cause optic atrophy 10, with or without ataxia, cognitive disability, and seizures. There is a pseudogene for this gene on chromosome 12. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2016]
RTN4IP1 Products (2)
| mRNA | Protein | Name |
|---|---|---|
| NM_001318746.1 | NP_001305675.1 | reticulon-4-interacting protein 1, mitochondrial isoform 2 |
| NM_032730.5 | NP_116119.2 | reticulon-4-interacting protein 1, mitochondrial isoform 1 precursor |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables NADPH dehydrogenase (quinone) activity |
IDA
IDA: Inferred from direct assay
|
37884807 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
29892012 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| involved in ubiquinone biosynthetic process |
IDA
IDA: Inferred from direct assay
|
37884807 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| is active in mitochondrial matrix |
IDA
IDA: Inferred from direct assay
|
37884807 | GOA |
| located in mitochondrial outer membrane |
IDA
IDA: Inferred from direct assay
|
26593267 | GOA |
RTN4IP1 Protein Structure
ADH_N: Alcohol dehydrogenase GroES-like domain (71 - 145)
ADH_zinc_N_2: Zinc-binding dehydrogenase (247 - 393)
- 0
- 100
- 200
- 300
- 396 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
reticulon-4-interacting protein 1, mitochondrial |
|
RTN4IP1 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
RTN4IP1 | Q8WWV3 | RELA | Homo sapiens | Q96CP1 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | HDX | Homo sapiens | Q7Z353 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | HDX | Homo sapiens | Q7Z353 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | CTAG1A | Homo sapiens | P78358 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | CTAG1A | Homo sapiens | P78358 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | SCAF1 | Homo sapiens | Q9H7N4 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | PPP1R8 | Homo sapiens | Q12972-2 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | PPP1R8 | Homo sapiens | Q12972-2 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | SORBS1 | Homo sapiens | Q9BX66-7 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | SORBS1 | Homo sapiens | Q9BX66-7 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | SORBS1 | Homo sapiens | Q9BX66-7 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | MARCHF5 | Homo sapiens | Q9NX47 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | MARCHF5 | Homo sapiens | Q9NX47 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | MARCHF5 | Homo sapiens | Q9NX47 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | PYM1 | Homo sapiens | Q9BRP8 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | PYM1 | Homo sapiens | Q9BRP8 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | PYM1 | Homo sapiens | Q9BRP8 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | ARFGAP3 | Homo sapiens | Q9NP61 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | ARFGAP3 | Homo sapiens | Q9NP61 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | ARFGAP3 | Homo sapiens | Q9NP61 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | SMURF2 | Homo sapiens | Q9HAU4 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | SMURF2 | Homo sapiens | Q9HAU4 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | SMURF2 | Homo sapiens | Q9HAU4 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | ZYX | Homo sapiens | Q15942 | 29892012 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | ZYX | Homo sapiens | Q15942 | 31515488 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | ZYX | Homo sapiens | Q15942 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | ZYX | Homo sapiens | Q15942 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | GGA2 | Homo sapiens | Q9UJY4 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | GGA2 | Homo sapiens | Q9UJY4 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | GGA2 | Homo sapiens | Q9UJY4 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | CENPK | Homo sapiens | Q9BS16 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | CENPK | Homo sapiens | Q9BS16 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | CENPK | Homo sapiens | Q9BS16 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | WWTR1 | Homo sapiens | Q9GZV5 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | WWTR1 | Homo sapiens | Q9GZV5 | 32296183 | |
|
Intra
|
RTN4IP1 | Q8WWV3 | WWTR1 | Homo sapiens | Q9GZV5 | 32296183 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Optic Atrophy 10 With Or Without Ataxia, Mental Retardation, And Seizures |
|
|
| Autosomal Recessive Isolated Optic Atrophy |
|
|
| Spinal Cord Injury |
|
|
| Optic Atrophy 9 |
|
|
| Optic Atrophy 7 With Or Without Auditory Neuropathy |
|
|
| Infantile Cerebellar-Retinal Degeneration |
|
|
| Optic Atrophy 5 |
|
|
| Pontocerebellar Hypoplasia, Type 1e |
|
|
| Optic Atrophy 6 |
|
|
| 3-Methylglutaconic Aciduria, Type Iii |
|
|
| Cerebellar Ataxia, Deafness, And Narcolepsy, Autosomal Dominant |
|
|
| Leber Hereditary Optic Neuropathy, Modifier Of |
|
|
| Mitochondrial Complex I Deficiency, Nuclear Type 1 |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Macaca mulatta | RTN4IP1 | VGNC | VGNC:77049 |
| Canis familiaris | RTN4IP1 | VGNC | VGNC:45796 |
| Mus musculus | RTN4IP1 | MGD | MGI:2178759 |
| Bos taurus | RTN4IP1 | VGNC | VGNC:34205 |
| Rattus norvegicus | RTN4IP1 | RGD | RGD:1563384 |
| Felis catus | RTN4IP1 | VGNC | VGNC:64812 |
| Others | RTN4IP1 | NCBI |