Autocrine interferon poisoning mediates ADAR1-dependent synthetic lethality in BRCA1/2-mutant cancers

  • Nat Commun. 2025 Jul 29;16(1):6972. doi: 10.1038/s41467-025-62309-5.
Roman M Chabanon  1  2  3  4 ,  Liudmila Shcherbakova  5  6 ,  Magali Lacroix-Triki  7  8 ,  Marine Aglave  9 ,  Jean Zeghondy  10 ,  Victor Kriaa  11 ,  Antoine Gougé  5  6 ,  Marlène Garrido  5  6 ,  Elodie Edmond  12 ,  Ludovic Bigot  13 ,  Dragomir B Krastev  14  15 ,  Rachel Brough  14  15 ,  Stephen J Pettitt  14  15 ,  Thibault Thomas-Bonafos  5  6  16 ,  Robert Samstein  17  18  19 ,  Christophe Massard  16 ,  Marc Deloger  9 ,  Andrew Nj Tutt  15  20 ,  Fabrice Barlesi  10 ,  Yohann Loriot  13  16 ,  Suzette Delaloge  10 ,  Marcel Tawk  11 ,  Cindy Degerny  11 ,  Yea-Lih Lin  21  22 ,  Barbara Pistilli  10 ,  Philippe Pasero  21  22 ,  Christopher J Lord  23  24 ,  Sophie Postel-Vinay  25  26  27  28
Affiliations
  • 1. The ERC (Epi)Genetic Vulnerabilities in Solid Tumors and Sarcoma Laboratory, Inserm Unit UMR981, Gustave Roussy, Villejuif, France. [email protected].
  • 2. Faculté de Médecine, Université Paris-Saclay, Le Kremlin Bicêtre, France. [email protected].
  • 3. The CRUK Gene Function Laboratory, The Institute of Cancer Research, London, UK. [email protected].
  • 4. The Breast Cancer Now Toby Robins Breast Cancer Research Centre, London, UK. [email protected].
  • 5. The ERC (Epi)Genetic Vulnerabilities in Solid Tumors and Sarcoma Laboratory, Inserm Unit UMR981, Gustave Roussy, Villejuif, France.
  • 6. Faculté de Médecine, Université Paris-Saclay, Le Kremlin Bicêtre, France.
  • 7. Molecular Characterization of Breast and Gynecological Cancers Laboratory, Inserm Unit UMR981, Gustave Roussy, Villejuif, France.
  • 8. Department of Pathology, Gustave Roussy, Villejuif, France.
  • 9. Bioinformatics (BiGR) Platform, Gustave Roussy, Villejuif, France.
  • 10. Department of Medical Oncology, Gustave Roussy, Villejuif, France.
  • 11. Inserm Unit U1195, University Paris-Saclay, Le Kremlin Bicêtre, France.
  • 12. Experimental and Translational Pathology (PETRA) Platform, AMMICa Unit (CNRS Unit UMS3655, Inserm Unit US23), Gustave Roussy, Villejuif, France.
  • 13. Adaptive Resistance to Anti-Cancer Therapies Laboratory, Inserm Unit UMR981, Gustave Roussy, Villejuif, France.
  • 14. The CRUK Gene Function Laboratory, The Institute of Cancer Research, London, UK.
  • 15. The Breast Cancer Now Toby Robins Breast Cancer Research Centre, London, UK.
  • 16. Drug Development Department (DITEP), Gustave Roussy, Villejuif, France.
  • 17. Department of Radiation Oncology, Memorial Sloan Kettering Cancer Center, New York, USA.
  • 18. Department of Radiation Oncology, Mount Sinai Hospital, New York, USA.
  • 19. Precision Immunology Institute at Icahn School of Medicine at Mount Sinai, New York, USA.
  • 20. The Breast Cancer Now Research Unit, Guy's Hospital Cancer Centre, King's College London, London, UK.
  • 21. The Ligue Contre Le Cancer Maintenance of Genome Integrity during DNA Replication Laboratory, CNRS Unit UMR9002, Institut de Génétique Humaine, Montpellier, France.
  • 22. Université de Montpellier, Montpellier, France.
  • 23. The CRUK Gene Function Laboratory, The Institute of Cancer Research, London, UK. [email protected].
  • 24. The Breast Cancer Now Toby Robins Breast Cancer Research Centre, London, UK. [email protected].
  • 25. The ERC (Epi)Genetic Vulnerabilities in Solid Tumors and Sarcoma Laboratory, Inserm Unit UMR981, Gustave Roussy, Villejuif, France. [email protected].
  • 26. Faculté de Médecine, Université Paris-Saclay, Le Kremlin Bicêtre, France. [email protected].
  • 27. Drug Development Department (DITEP), Gustave Roussy, Villejuif, France. [email protected].
  • 28. The University College of London Cancer Institute, University College of London, London, UK. [email protected].
Abstract

ADAR1 is an RNA editing enzyme which prevents autoimmunity by blocking interferon responses triggered by cytosolic RNA sensors, and is a potential target in immuno-oncology. However, predictive biomarkers for ADAR1 inhibition are lacking. Using multiple in vitro and in vivo systems, we show that BRCA1/2 and ADAR1 are synthetically lethal, and that ADAR1 activity is upregulated in BRCA1/2-mutant cancers. ADAR1 depletion in BRCA1-mutant cells causes an increase in R-loops and consequently, an upregulation of cytosolic nucleic acid sensing Pattern Recognition Receptors (PRR), events which are associated with a tumor cell-autonomous type I interferon and integrated stress response. This ultimately causes autocrine interferon poisoning. Consistent with a key role of R-loops in this process, exogenous RNase H1 expression reverses the synthetic lethality. Pharmacological suppression of cell-autonomous interferon responses or transcriptional silencing of cytosolic nucleic acid sensing PRR are also sufficient to abrogate ADAR1 dependency in BRCA1-mutant cells, in line with autocrine interferon poisoning playing a central part in this synthetic lethality. Our findings provide a preclinical rationale for assessing ADAR1-targeting agents in BRCA1/2-mutant cancers, and introduces a conceptually novel approach to synthetic lethal treatments, which exploits tumor cell-intrinsic cytosolic immunity as a targetable vulnerability of Cancer cells.

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