XRCC4 - X-ray repair cross complementing 4 Gene

Also Known as SSMED; hXRCC4

Species: Homo sapiens

Gene Type: protein coding
Gene ID: 7518

About XRCC4

Cytogenetic location: 5q14.2 Genomic coordinates (GRCh38): 5:83,077,547-83,374,473 (from NCBI)

This gene has 6 transcripts (splice variants), 125 orthologues and is associated with 4 phenotypes. Ubiquitous expression in testis (RPKM 2.7), lymph node (RPKM 2.1) and 25 other tissues.

Summary

The protein encoded by this gene functions together with DNA Ligase IV and the DNA-dependent protein kinase in the repair of DNA double-strand breaks. This protein plays a role in both non-homologous end joining and the completion of V(D)J recombination. Mutations in this gene can cause short stature, microcephaly, and endocrine dysfunction (SSMED). Alternate transcript variants such as NM_022406 are unlikely to be expressed in some individuals due to a polymorphism (rs1805377) in the last splice acceptor site. [provided by RefSeq, Oct 2019]

XRCC4 Products (5)

mRNA Protein Name
NM_001318012.3 NP_001304941.1 DNA repair protein XRCC4 isoform 2
NM_001318013.2 NP_001304942.1 DNA repair protein XRCC4 isoform 3
NM_003401.5 NP_003392.1 DNA repair protein XRCC4 isoform 1
NM_022406.5 NP_071801.1 DNA repair protein XRCC4 isoform 2
NM_022550.4 NP_072044.1 DNA repair protein XRCC4 isoform 1
Molecular Function GO Annotation Evidence Verweise Source
NOT enables DNA binding IDA
IDA: Inferred from direct assay
9259561 GOA
enables FHA domain binding IPI
IPI: Inferred from physical interaction
15385968 GOA
enables identical protein binding IPI
IPI: Inferred from physical interaction
16169070 GOA
NOT enables ligase activity IDA
IDA: Inferred from direct assay
9242410 GOA
enables protein binding IPI
IPI: Inferred from physical interaction
9259561 GOA
Biological Process GO Annotation Evidence Verweise Source
involved in DNA ligation involved in DNA repair IDA
IDA: Inferred from direct assay
12517771 GOA
involved in double-strand break repair IDA
IDA: Inferred from direct assay
9242410 GOA
involved in double-strand break repair via nonhomologous end joining IDA
IDA: Inferred from direct assay
12517771 GOA
involved in double-strand break repair via nonhomologous end joining IMP
IMP: Inferred from mutant phenotype
9809069 GOA
involved in positive regulation of ligase activity IDA
IDA: Inferred from direct assay
9242410 GOA
involved in positive regulation of phosphatidylserine exposure on apoptotic cell surface IDA
IDA: Inferred from direct assay
33725486 GOA
involved in protein localization to site of double-strand break IDA
IDA: Inferred from direct assay
31548606 GOA
involved in response to X-ray IDA
IDA: Inferred from direct assay
9242410 GOA
Cellular Component GO Annotation Evidence Verweise Source
part of DNA ligase IV complex IDA
IDA: Inferred from direct assay
9242410 GOA
part of DNA-dependent protein kinase-DNA ligase 4 complex IDA
IDA: Inferred from direct assay
15194694 GOA
NOT located in condensed chromosome IDA
IDA: Inferred from direct assay
12589063 GOA
is active in cytoplasm IDA
IDA: Inferred from direct assay
33725486 GOA
located in cytosol IDA
IDA: Inferred from direct assay
9259561 GOA
part of nonhomologous end joining complex IDA
IDA: Inferred from direct assay
20383123 GOA
is active in nucleus IDA
IDA: Inferred from direct assay
25597996 GOA
located in nucleus IDA
IDA: Inferred from direct assay
9259561 GOA
is active in site of double-strand break IDA
IDA: Inferred from direct assay
26774286 GOA
located in site of double-strand break IDA
IDA: Inferred from direct assay
31548606 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

XRCC4 Protein Structure

XRCC4

XRCC4: DNA double-strand break repair and V(D)J recombination protein XRCC4 (1 - 334)

  • 0
  • 100
  • 200
  • 300
  • 336 a.a.
Protein Preferred Names Protein Names

DNA repair protein XRCC4

  • X-ray repair complementing defective repair in Chinese hamster cells 4

XRCC4 Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method Verweise
Intra
XRCC4 Q13426 FAM9B Homo sapiens Q8IZU0 31515488
Intra
XRCC4 Q13426 FAM9B Homo sapiens Q8IZU0 25416956
Intra
XRCC4 Q13426 FAM9B Homo sapiens Q8IZU0 32296183
Intra
XRCC4 Q13426 FAM9B Homo sapiens Q8IZU0 25416956
Intra
XRCC4 Q13426 PNKP Homo sapiens Q96T60 32296183
Intra
XRCC4 Q13426 PNKP Homo sapiens Q96T60 15385968
Intra
XRCC4 Q13426 PNKP Homo sapiens Q96T60 33961781
Intra
XRCC4 Q13426 PNKP Homo sapiens Q96T60 28514442
Intra
XRCC4 Q13426 PNKP Homo sapiens Q96T60 21637298
Intra
XRCC4 Q13426 MAGEA6 Homo sapiens P43360 32296183
Intra
XRCC4 Q13426 MAGEA6 Homo sapiens P43360 32296183
Intra
XRCC4 Q13426 APLF Homo sapiens Q8IW19
Y2H
23178593
Intra
XRCC4 Q13426 XRCC4 Homo sapiens Q13426-3 25910212
Intra
XRCC4 Q13426 XRCC4 Homo sapiens Q13426-3 25910212
Intra
XRCC4 Q13426 XRCC4 Homo sapiens Q13426-3 25910212
Intra
XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4-1 21768349
Intra
XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4-1
GMS
21768349
Intra
XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4-1
ITC
21768349
Intra
XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4-1
TEM
21768349
Intra
XRCC4 Q13426 GSC2 Homo sapiens O15499 32296183
Intra
XRCC4 Q13426 GSC2 Homo sapiens O15499 32296183
Intra
XRCC4 Q13426 IFFO1 Homo sapiens Q0D2I5-5 31548606
Intra
XRCC4 Q13426 ASTE1 Homo sapiens Q2TB18 25416956
Intra
XRCC4 Q13426 KRT27 Homo sapiens Q7Z3Y8 32296183
Intra
XRCC4 Q13426 KRT27 Homo sapiens Q7Z3Y8 32296183
Intra
XRCC4 Q13426 KRT27 Homo sapiens Q7Z3Y8 32296183
Intra
XRCC4 Q13426 LIG4 Homo sapiens P49917 25416956
Intra
XRCC4 Q13426 LIG4 Homo sapiens P49917 25416956
Intra
XRCC4 Q13426 LIG4 Homo sapiens P49917 33961781
Intra
XRCC4 Q13426 LIG4 Homo sapiens P49917 31548606
Intra
XRCC4 Q13426 LIG4 Homo sapiens P49917 28514442
Intra
XRCC4 Q13426 LIG4 Homo sapiens P49917 31548606
Intra
XRCC4 Q13426 LIG4 Homo sapiens P49917 11702069
Intra
XRCC4 Q13426 BIN1 Homo sapiens O00499
Y2H
16275660
Intra
XRCC4 Q13426 HAUS2 Homo sapiens Q9NVX0 32296183
Intra
XRCC4 Q13426 HAUS2 Homo sapiens Q9NVX0 32296183
Intra
XRCC4 Q13426 HAUS2 Homo sapiens Q9NVX0 32296183
Intra
XRCC4 Q13426 IFFO1 Homo sapiens Q0D2I5 33961781
Intra
XRCC4 Q13426 IFFO1 Homo sapiens Q0D2I5 16189514
Intra
XRCC4 Q13426 IFFO1 Homo sapiens Q0D2I5 31548606
Intra
XRCC4 Q13426 IFFO1 Homo sapiens Q0D2I5 31548606
Intra
XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4 16439205
Intra
XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4 16439205
Intra
XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4 29997244
Intra
XRCC4 Q13426 NHEJ1 Homo sapiens Q9H9Q4 16439205
Intra
XRCC4 Q13426 APTX Homo sapiens Q7Z2E3 33961781
Cross: Cross-species interaction Intra: Intraspecies interaction

XRCC4 Antibodies

Art. -Nr. Produktname Anwendung Reactivity
HY-P81337 XRCC4 Antibody (YA1082) WB, IHC-F, IHC-P, ICC/IF, IP Human, Mouse, Rat
HY-P81337A XRCC4 Antibody (YA1082)(PBS only) WB, IHC-F, IHC-P, ICC/IF, IP Human, Mouse, Rat
HY-P85669 XRCC4 Antibody (YA5361) WB, IHC-P, ICC/IF, IP Human

Related Diseases

Diseases Alias
Short Stature, Microcephaly, And Endocrine Dysfunction
  • SSMED

Microcephalic Primordial Dwarfism-Insulin Resistance Syndrome
Isolated Growth Hormone Deficiency, Type Ia
  • Ighd Ia

  • Primordial Dwarfism

  • Isolated Growth Hormone Deficiency Type Ia

  • Sexual Ateleiotic Dwarfism

  • Pituitary Dwarfism I

  • IGHD1A

  • Illig-Type Growth Hormone Deficiency

  • Growth Hormone Deficiency, Isolated, Type Ia

  • Congenital Ighd Type Ia

  • Congenital Isolated Gh Deficiency Type Ia

  • Congenital Isolated Growth Hormone Deficiency Type Ia

  • Pituitary Dwarfism 1

  • Growth Hormone Deficiency, Isolated, Autosomal Recessive

  • Autosomal Recessive Isolated Growth Hormone Deficiency

  • Isolated Growth Hormone Deficiency Type 1a

  • Congenital Ighd

  • Congenital Isolated Gh Deficiency

  • Congenital Isolated Growth Hormone Deficiency

  • Growth Hormone Deficiency, Isolated Autosomal Recessive

  • Illig Type Growth Hormone Deficiency

  • Non-Acquired Isolated Growth Hormone Deficiency

  • Growth Hormone Deficiency, Isolated, 1a

  • Growth Hormone Deficiency Isolated Autosomal Recessive

  • Dwarfism, Primordial

  • Dwarfism

Lig4 Syndrome
  • Dna Ligase Iv Deficiency

  • Ligase 4 Syndrome

  • LIG4S

Severe Combined Immunodeficiency With Sensitivity To Ionizing Radiation
  • Severe Combined Immunodeficiency, Athabascan Type

  • Severe Combined Immunodeficiency Due To Dclre1c Deficiency

  • Rs-Scid

  • Scid, Autosomal Recessive, T Cell-Negative, B Cell-Negative, Nk Cell-Positive, With Sensitivity To Ionizing Radiation

  • Scid Due To Artemis Deficiency

  • Scid Due To Dclre1c Deficiency

  • Scid, Athabascan Type

  • Scid, Athabaskan Type

  • Severe Combined Immunodeficiency Due To Artemis Deficiency

  • Severe Combined Immunodeficiency, Athabaskan Type

  • SCIDA

  • Severe Combined Immunodeficiency, Athabascan-Type

  • Artemis Deficiency

  • Severe Combined Immunodeficiency Athabaskan Type

  • Severe Combined Immunodeficiency Autosomal Recessive T-Cell-Negative/B-Cell-Negative/Nk-Cell-Positive With Sensitivity To Ionizing Radiation

  • RSSCID

  • Athabascan Scid

  • Immunodeficiency, Severe Combined, Athabascan Type

  • Severe Combined Immunodeficiency, Athabaskan-Type

Microcephaly
  • Microencephaly

  • Microcephalus

  • Microcephalic

  • Nanocephaly

  • Congenital Microcephaly

  • Brain Hypoplasia

  • Brain Nondevelopment

  • Cephalic Hypoplasia

  • Undeveloped Cerebrum

  • Undeveloped Brain

  • Micrencephalon

  • Micrencephaly

Combined Immunodeficiency
  • Combined T Cell And B Cell Immunodeficiency

  • Congenital Combined Immunodeficiency

  • Syndrome With Combined Immunodeficiency

  • Combined T And B Cell Immunodeficiency

  • Combined Immunity Deficiency

  • Combined Immunodeficiency Syndrome

  • Combined T-Cell And B-Cell Immunodeficiency

  • Lymphopenic Agammaglobulinaemia

Dubowitz Syndrome
  • Dubowitz'S Syndrome

  • Dwarfism-Eczema-Peculiar Facies Syndrome

  • Intrauterine Growth Restriction, Short Stature, Microcephaly, Mild Intellectual Disability With Behavior Problems, Eczema, And Unusual And Distinctive Faci

Multinodular Goiter
Spinocerebellar Ataxia Type 1 With Axonal Neuropathy
  • Scan1

  • Spinocerebellar Ataxia With Axonal Neuropathy Type 1

  • Autosomal Recessive Spinocerebellar Ataxia With Axonal Neuropathy

  • Scan1, Tdp1-Related Spinocerebellar Ataxia With Axonal Neuropathy

  • Spinocerebellar Ataxia Autosomal Recessive With Axonal Neuropathy

  • Spinocerebellar Ataxia With Axonal Neuropathy

  • Spinocerebellar Ataxia, Autosomal Recessive, With Axonal Neuropathy

  • Ataxia, Spinocerebellar, Autosomal Recessive With Axonal Neuropathy

Severe Combined Immunodeficiency
  • Scid

  • Severe Combined Immunodeficiency Disease

  • Combined T And B Cell Inborn Immunodeficiency

  • Immunodeficiency, Severe Combined

  • Scid - [Severe Combined Immunodeficiencies]

Charcot-Marie-Tooth Disease, Axonal, Type 2b2
  • Charcot-Marie-Tooth Disease Type 2b2

  • CMT2B2

  • Arcmt2b

  • Charcot-Marie-Tooth Disease, Type 2b2

  • Ar-Cmt2b2

  • Autosomal Recessive Axonal Charcot-Marie-Tooth Disease Type 2b2

  • Autosomal Recessive Axonal Cmt4c3

  • Charcot-Marie-Tooth Disease Neuronal Type 2b2

  • Charcot-Marie-Tooth Neuropathy Type 2b2

  • Charcot-Marie-Tooth Disease, Axonal, Autosomal Recessive, Type 2b2

  • Charcot-Marie-Tooth Disease, Neuronal, Type 2b2

  • Charcot-Marie-Tooth Neuropathy, Type 2b2

  • Charcot-Marie-Tooth Disease 2b2

  • Charcot-Marie-Tooth Disease Axonal Autosomal Recessive B2

  • Charcot-Marie-Tooth Disease Axonal Type 2b2

Seckel Syndrome
  • Microcephalic Primordial Dwarfism

  • Bird-Headed Dwarfism

  • Harper'S Syndrome

  • Virchow-Seckel Dwarfism

  • Nanocephalic Dwarfism

  • Sckl

  • Seckel-Type Dwarfism

Autosomal Recessive Cerebellar Ataxia
  • Arca

Xeroderma Pigmentosum, Variant Type
  • Xeroderma Pigmentosum

  • XPV

  • Xeroderma Pigmentosum Variant Type

  • Xeroderma Pigmentosum With Normal Dna Repair Rates

  • Photosensitivity With Defective Dna Synthesis

  • Xp

  • De Sanctis-Cacchione Syndrome

  • Desanctis-Cacchione Syndrome

  • Xeroderma Pigmentosa

  • Xerodermic Idiocy

  • Xeroderma Pigmentosum Variant

  • Xp - [Xeroderma Pigmentosum]

  • Atrophoderma Pigmentosum

Nijmegen Breakage Syndrome
  • Berlin Breakage Syndrome

  • NBS

  • Microcephaly, Normal Intelligence And Immunodeficiency

  • Ataxia-Telangiectasia Variant

  • Ataxia-Telangiectasia Variant V1

  • Seemanova Syndrome Ii

  • Immunodeficiency-Microcephaly-Chromosomal Instability Syndrome

  • Seemanova Syndrome Type 2

  • At-V1

  • Microcephaly With Normal Intelligence, Immunodeficiency, And Lymphoreticular Malignancies

  • Nonsyndromal Microcephaly, Autosomal Recessive, With Normal Intelligence

  • Immunodeficiency, Microcephaly, And Chromosomal Instability

  • Microcephaly-Immunodeficiency-Lymphoreticuloma Syndrome

  • Microcephaly Immunodeficiency Lymphoreticuloma

  • Microcephaly With Normal Intelligence Immunodeficiency And Lymphoreticular Malignancies

  • Nonsyndromal Microcephaly Autosomal Recessive With Normal Intelligence

  • Seemanova Syndrome 2

  • Ataxia-Telangiectasia Variant 1

  • Seemanova Syndrome

  • At V1

  • Ataxia-Telangiectasia, Variant 1

  • Microcephaly-Immunodeficiency-Lymphoid Malignancy Syndrome

  • V-At

  • Ataxia Telangiectasia Variant V1

Omenn Syndrome
  • Histiocytic Medullary Reticulosis

  • Severe Combined Immunodeficiency With Hypereosinophilia

  • Combined Immunodeficiency With Hypereosinophilia

  • Reticuloendotheliosis, Familial, With Eosinophilia

  • Reticuloendotheliosis Familial With Eosinophilia

  • Familial Reticuloendotheliosis

  • Omenn'S Syndrome

  • OS

  • Malignant Histiocytosis

Cockayne Syndrome A
  • Cockayne Syndrome Type 1

  • Cockayne Syndrome, Type A

  • Cockayne Syndrome Type I

  • CSA

  • Cockayne Syndrome Classic Form

  • Cockayne Syndrome Classical

  • Cockayne Syndrome Type A

  • Ckn1

Trichothiodystrophy
  • Ttd

  • Amish Brittle Hair Syndrome

  • Bids Syndrome

  • Brittle Hair-Intellectual Impairment-Decreased Fertility-Short Stature Syndrome

  • Ibids

  • Pibids

  • Trichothiodystrophy Syndromes

Autism Spectrum Disorder
  • Asd

  • Autism Spectrum Disorders

  • Autistic Continuum

  • Pervasive Developmental Disorder

  • Pervasive Development Disorder

  • Autistic Behavior

  • Autistic Disorder

  • Autistic

  • Autistic Disorder Of Childhood Onset

  • Infantile Autism

  • Childhood Autism

  • Kanner Syndrome

  • Pervasive Developmental Delay Nos

  • Pervasive Developmental Disorder, Not Otherwise Specified

Breast Cancer
  • Breast Carcinoma

  • Male Breast Cancer

  • Breast Cancer, Familial

  • Malignant Neoplasm Of Breast

  • Breast Cancer, Susceptibility To

  • Breast Cancer, Early-Onset

  • Malignant Tumor Of Breast

  • Carcinoma Of Male Breast

  • Breast Cancer, Invasive Ductal

  • Breast Cancer, Protection Against

  • Breast Cancer, Somatic

  • Breast Cancer, Male

  • Breast Cancer, Lobular, Somatic

  • Breast Tumor

  • Mammary Cancer

  • Mammary Tumor

  • Malignant Neoplasm Of Male Breast

  • Mammary Carcinoma

  • Male Breast Carcinoma

  • Familial Cancer Of Breast

  • Invasive Ductal Breast Carcinoma

  • Breast Cancer Susceptibility

  • Breast Cancer, Male, Susceptibility To

  • Breast Cancer, Early-Onset, Susceptibility To

  • Malignant Tumor Of The Breast

  • Mammary Neoplasm

  • Primary Breast Cancer

  • Neoplasm Of Male Breast

  • Carcinoma Of Breast

  • Breast Cancer In Men

  • Familial Breast Cancer

  • Cancer Of Breast

  • BC

  • Breast Cancer Familial

  • Breast Cancer Familial Male

  • Breast Cancer, Familial Male

  • Breast Male Carcinoma

  • Breast Neoplasms

  • Breast Neoplasms, Male

  • Mammary Tumors

  • Mammary Carcinomas

  • Cancer, Breast

  • Cancer, Breast, Susceptibility

  • Invasive Breast Ductal Carcinoma

  • Breast Neoplasm

  • Susceptibility To Breast Cancer

  • Mammary Neoplasms

  • Animal Mammary Neoplasms

  • Primary Malignant Neoplasm Of Breast

  • Infiltrating Ductal Carcinoma Of Breast

  • Infiltrating Duct Carcinoma Of Unspecified Site

  • Infiltrating Ductular Carcinoma Of Unspecified Site

  • Invasive Breast Carcinoma Of No Special Type

  • Microinvasive Carcinoma Of Breast

  • Carcinoma With Apocrine Differentiation

Hereditary Breast Ovarian Cancer Syndrome
  • Hereditary Breast And Ovarian Cancer Syndrome

  • Brca1- And Brca2-Associated Hereditary Breast And Ovarian Cancer

  • Breast And/Or Ovarian Cancer

  • Breast And Ovarian Cancer Syndrome

  • Hboc Syndrome

  • Hereditary Breast And Ovarian Cancer

  • Brca1- Brca2-Associated Hboc

Congenital Nervous System Abnormality
  • Congenital Neurologic Anomaly

  • Congenital Nervous System Disorder

Aplastic Anemia
  • Aplastic Anemia, Susceptibility To

  • Anemia Aplastic

  • Idiopathic Aplastic Anemia

  • Secondary Aplastic Anemia

  • Idiopathic Bone Marrow Failure

  • Aplastic Anemia Idiopathic

  • AA

  • Anemia, Aplastic

  • Aplastic Anemia, Idiopathic

  • Erythroid Aplasia

  • Aa - [Aplastic Anaemia]

  • Haematopoietic Aplasia

  • Aleukia Haemorrhagica

  • Anaemia Due To Decreased Red Cell Production

  • Aplasia Bone Marrow

  • Aplastic Bone Marrow

  • Hypoplastic Anaemia Nos

  • Myeloid Bone Marrow Aplasia

  • Pancytopenia

  • Panhaematopenia

  • Hypoproliferative Anaemia

  • Medullary Hypoplasia

  • Red Blood Cells Hypoplastic Anaemia

  • Panmyelophthisis

  • Panhemocytopenia

  • Refractive Hypoproliferative Anaemia

  • Toxic Anaemia

  • Toxic Aplastic Anaemia

  • Aplastic Anaemia Due To Toxic Cause

  • Idiopathic Aplastic Anaemia Nos

Fanconi Anemia, Complementation Group A
  • Fanconi Anemia

  • Fanconi Pancytopenia

  • Fanconi Anemia Complementation Group A

  • FANCA

  • Fa

  • Fanconi Panmyelopathy

  • Fanconi'S Anemia

  • Fanconi Anaemia

  • Fanconi'S Anaemia

  • Fanconi Hypoplastic Anemia

  • Estren-Dameshek Variant Of Fanconi Anemia

  • Estren-Dameshek Variant Of Fanconi Pancytopenia

  • Fanconi Anemia Estren-Dameshek Variant

  • Fanconis Anemia

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Canis familiaris XRCC4 VGNC VGNC:48468
Macaca mulatta XRCC4 VGNC VGNC:110421
Felis catus XRCC4 VGNC VGNC:67119
Bos taurus XRCC4 VGNC VGNC:37005
Rattus norvegicus XRCC4 RGD RGD:1359573
Mus musculus XRCC4 MGD MGI:1333799
Others XRCC4 NCBI