GSC2 - goosecoid homeobox 2 Gene
Also Known as GSCL
Species: Homo sapiens
About GSC2
This gene has 1 transcript (splice variant), 133 orthologues and 50 paralogues. Low expression observed in reference dataset.
Summary
Goosecoidlike (GSCL), a homeodomain-containing gene, resides in the critical region for VCFS/DGS on 22q11. Velocardiofacial syndrome (VCFS) is a developmental disorder characterized by conotruncal heart defects, craniofacial anomalies, and learning disabilities. VCFS is phenotypically related to DiGeorge syndrome (DGS) and both syndromes are associated with hemizygous 22q11 deletions. Because many of the tissues and structures affected in VCFS/DGS derive from the pharyngeal arches of the developing embryo, it is believed that haploinsufficiency of a gene involved in embryonic development may be responsible for its etiology. The gene is expressed in a limited number of adult tissues, as well as in early human development. [provided by RefSeq, Jul 2008]
GSC2 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_005315.2 | NP_005306.1 | homeobox protein goosecoid-2 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables DNA-binding transcription factor activity |
IDA
IDA: Inferred from direct assay
|
9700206 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
32296183 | GOA |
| enables sequence-specific DNA binding |
IDA
IDA: Inferred from direct assay
|
23332764 | GOA |
| enables sequence-specific double-stranded DNA binding |
IDA
IDA: Inferred from direct assay
|
28473536 | GOA |
| Biological Process GO Annotation | Evidence | References | Source |
|---|---|---|---|
| acts upstream of or within regulation of transcription by RNA polymerase II |
IDA
IDA: Inferred from direct assay
|
9700206 | GOA |
GSC2 Protein Structure
Homeobox: Homeobox domain (127 - 183)
- 0
- 100
- 205 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
homeobox protein goosecoid-2 |
|
GSC2 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
GSC2 | O15499 | MID2 | Homo sapiens | Q9UJV3-2 | 32296183 | |
|
Intra
|
GSC2 | O15499 | GCM2 | Homo sapiens | O75603 | 32296183 | |
|
Intra
|
GSC2 | O15499 | LCE3E | Homo sapiens | Q5T5B0 | 32296183 | |
|
Intra
|
GSC2 | O15499 | MORF4L1 | Homo sapiens | Q9UBU8-2 | 32296183 | |
|
Intra
|
GSC2 | O15499 | KRT34 | Homo sapiens | O76011 | 32296183 | |
|
Intra
|
GSC2 | O15499 | CALR | Homo sapiens | P27797 | 32296183 | |
|
Intra
|
GSC2 | O15499 | PRKAB2 | Homo sapiens | O43741 | 32296183 | |
|
Intra
|
GSC2 | O15499 | MRPS23 | Homo sapiens | Q9Y3D9 | 32296183 | |
|
Intra
|
GSC2 | O15499 | C19orf47 | Homo sapiens | Q8N9M1-2 | 32296183 | |
|
Intra
|
GSC2 | O15499 | YPEL5 | Homo sapiens | P62699 | 32296183 | |
|
Intra
|
GSC2 | O15499 | EGLN3 | Homo sapiens | Q9H6Z9 | 32296183 | |
|
Intra
|
GSC2 | O15499 | VCX2 | Homo sapiens | Q3SXR9 | 32296183 | |
|
Intra
|
GSC2 | O15499 | ZNF444 | Homo sapiens | Q8N0Y2-2 | 32296183 | |
|
Intra
|
GSC2 | O15499 | ASPH | Homo sapiens | Q12797-6 | 32296183 | |
|
Intra
|
GSC2 | O15499 | ALPP | Homo sapiens | P05187 | 32296183 | |
|
Intra
|
GSC2 | O15499 | PDE4C | Homo sapiens | Q08493-2 | 32296183 | |
|
Intra
|
GSC2 | O15499 | SCAF1 | Homo sapiens | Q9H7N4 | 32296183 | |
|
Intra
|
GSC2 | O15499 | LTO1 | Homo sapiens | Q8WV07 | 32296183 | |
|
Intra
|
GSC2 | O15499 | CRCP | Homo sapiens | O75575-2 | 32296183 | |
|
Intra
|
GSC2 | O15499 | GALNT11 | Homo sapiens | Q8NCW6-2 | 32296183 | |
|
Intra
|
GSC2 | O15499 | GTSF1L | Homo sapiens | Q9H1H1 | 32296183 | |
|
Intra
|
GSC2 | O15499 | BEST3 | Homo sapiens | Q8N1M1-5 | 32296183 | |
|
Intra
|
GSC2 | O15499 | UBE2R2 | Homo sapiens | Q712K3 | 32296183 | |
|
Intra
|
GSC2 | O15499 | MRPL53 | Homo sapiens | Q96EL3 | 32296183 | |
|
Intra
|
GSC2 | O15499 | TIPIN | Homo sapiens | Q9BVW5 | 32296183 | |
|
Intra
|
GSC2 | O15499 | HMBOX1 | Homo sapiens | Q6NT76 | 32296183 | |
|
Intra
|
GSC2 | O15499 | ETFDH | Homo sapiens | Q16134 | 32296183 | |
|
Intra
|
GSC2 | O15499 | ANXA5 | Homo sapiens | P08758 | 32296183 | |
|
Intra
|
GSC2 | O15499 | CSNK2A1 | Homo sapiens | P68400 | 32296183 | |
|
Intra
|
GSC2 | O15499 | EIF5A | Homo sapiens | P63241 | 32296183 | |
|
Intra
|
GSC2 | O15499 | C1D | Homo sapiens | Q13901 | 32296183 | |
|
Intra
|
GSC2 | O15499 | KRTAP5-9 | Homo sapiens | P26371 | 32296183 | |
|
Intra
|
GSC2 | O15499 | PTER | Homo sapiens | Q96BW5 | 32296183 | |
|
Intra
|
GSC2 | O15499 | KDM6A | Homo sapiens | O15550 | 32296183 | |
|
Intra
|
GSC2 | O15499 | MARF1 | Homo sapiens | Q9Y4F3 | 32296183 | |
|
Intra
|
GSC2 | O15499 | DYRK1B | Homo sapiens | Q9Y463 | 32296183 | |
|
Intra
|
GSC2 | O15499 | GTF2H5 | Homo sapiens | Q6ZYL4 | 32296183 | |
|
Intra
|
GSC2 | O15499 | ISX | Homo sapiens | Q2M1V0 | 32296183 | |
|
Intra
|
GSC2 | O15499 | KLHL38 | Homo sapiens | Q2WGJ6 | 32296183 | |
|
Intra
|
GSC2 | O15499 | ZNF587 | Homo sapiens | Q96SQ5 | 32296183 | |
|
Intra
|
GSC2 | O15499 | GUCA1A | Homo sapiens | P43080 | 32296183 | |
|
Intra
|
GSC2 | O15499 | GUCY1A2 | Homo sapiens | P33402 | 32296183 | |
|
Intra
|
GSC2 | O15499 | MAPK9 | Homo sapiens | P45984 | 32296183 | |
|
Intra
|
GSC2 | O15499 | XRCC4 | Homo sapiens | Q13426 | 32296183 | |
|
Intra
|
GSC2 | O15499 | PACSIN2 | Homo sapiens | Q9UNF0 | 32296183 | |
|
Intra
|
GSC2 | O15499 | FKBP6 | Homo sapiens | O75344 | 32296183 | |
|
Intra
|
GSC2 | O15499 | NME7 | Homo sapiens | Q9Y5B8 | 32296183 | |
|
Intra
|
GSC2 | O15499 | CDKN2D | Homo sapiens | P55273 | 32296183 | |
|
Intra
|
GSC2 | O15499 | CDKN2D | Homo sapiens | P55273 | 32296183 | |
|
Intra
|
GSC2 | O15499 | TSR2 | Homo sapiens | Q969E8 | 32296183 | |
|
Intra
|
GSC2 | O15499 | COL8A1 | Homo sapiens | P27658 | 32296183 | |
|
Intra
|
GSC2 | O15499 | CIAO2A | Homo sapiens | Q9H5X1 | 32296183 | |
|
Intra
|
GSC2 | O15499 | BNIP2 | Homo sapiens | Q12982 | 32296183 | |
|
Intra
|
GSC2 | O15499 | MAD2L2 | Homo sapiens | Q9UI95 | 32296183 |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Digeorge Syndrome |
|
|
| Velocardiofacial Syndrome |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Rattus norvegicus | GSC2 | RGD | RGD:1305333 |
| Mus musculus | GSC2 | MGD | MGI:892006 |
| Macaca mulatta | GSC2 | VGNC | VGNC:73297 |
| Felis catus | GSC2 | VGNC | VGNC:107708 |
| Bos taurus | GSC2 | VGNC | VGNC:97276 |
| Others | GSC2 | NCBI |