TBX5 - T-box transcription factor 5 Gene
Also Known as HOS
Species: Homo sapiens
About TBX5
This gene has 5 transcripts (splice variants), 228 orthologues, 16 paralogues and is associated with 4 phenotypes. Biased expression in heart (RPKM 12.5), placenta (RPKM 8.8) and 6 other tissues.
Summary
This gene is a member of a phylogenetically conserved family of genes that share a common DNA-binding domain, the T-box. T-box genes encode transcription factors involved in the regulation of developmental processes. This gene is closely linked to related family member T-box 3 (ulnar mammary syndrome) on human chromosome 12. The encoded protein may play a role in heart development and specification of limb identity. Mutations in this gene have been associated with Holt-Oram syndrome, a developmental disorder affecting the heart and upper limbs. Several transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jul 2008]
TBX5 Products (3)
| mRNA | Protein | Name |
|---|---|---|
| NM_000192.3 | NP_000183.2 | T-box transcription factor TBX5 isoform 1 |
| NM_080717.4 | NP_542448.1 | T-box transcription factor TBX5 isoform 3 |
| NM_181486.4 | NP_852259.1 | T-box transcription factor TBX5 isoform 1 |
| Molecular Function GO Annotation | Evidence | References | Source |
|---|---|---|---|
| enables DNA binding |
IDA
IDA: Inferred from direct assay
|
16332960 | GOA |
| enables DNA-binding transcription factor activity |
IDA
IDA: Inferred from direct assay
|
11431700 | GOA |
| enables DNA-binding transcription factor activity |
IMP
IMP: Inferred from mutant phenotype
|
11431700 | GOA |
| enables DNA-binding transcription factor activity, RNA polymerase II-specific |
IDA
IDA: Inferred from direct assay
|
29174768 | GOA |
| enables RNA polymerase II cis-regulatory region sequence-specific DNA binding |
IDA
IDA: Inferred from direct assay
|
26926761 | GOA |
| enables RNA polymerase II-specific DNA-binding transcription factor binding |
IPI
IPI: Inferred from physical interaction
|
11431700 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
11431700 | GOA |
| enables sequence-specific DNA binding |
IDA
IDA: Inferred from direct assay
|
11431700 | GOA |
| Cellular Component GO Annotation | Evidence | References | Source |
|---|---|---|---|
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
14519429 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
12237100 | GOA |
| part of protein-DNA complex |
IDA
IDA: Inferred from direct assay
|
26926761 | GOA |
| part of protein-containing complex |
IDA
IDA: Inferred from direct assay
|
26926761 | GOA |
TBX5 Protein Structure
T-box: T-box (56 - 237)
- 0
- 100
- 200
- 300
- 400
- 518 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
T-box transcription factor TBX5 |
|
TBX5 Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
TBX5 | Q99593 | YAP1 | Homo sapiens | P46937 | 23245941 | |
|
Cross
|
TBX5 | Q99593 | Gata4 | Mus musculus | Q08369 | 12845333 | |
|
Intra
|
TBX5 | Q99593 | BAIAP2 | Homo sapiens | Q9UQB8-6 | 32296183 |
TBX5 Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P810319 | TBX5 Antibody | IHC-P, ELISA | Human |
| HY-P85384 | TBX5 Antibody (YA5076) | WB | Human |
| HY-P85384A | TBX5 Antibody (YA5076)(PBS only) | WB | Human |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Holt-Oram Syndrome |
|
|
| Patent Foramen Ovale |
|
|
| Mitral Valve Insufficiency |
|
|
| Heart Disease |
|
|
| Aortic Valve Disease 2 |
|
|
| Heart, Malformation Of |
|
|
| Ventricular Septal Defect |
|
|
| Atrial Septal Defect 2 |
|
|
| Atrial Septal Defect 1 |
|
|
| Long Qt Syndrome 1 |
|
|
| Ulnar-Mammary Syndrome |
|
|
| Tièche-Jadassohn Nevus |
|
|
| Atrioventricular Septal Defect |
|
|
| Radial Ray Deficiency, X-Linked |
|
|
| Thumb Deformity |
|
|
| Atrial Heart Septal Defect |
|
|
| Heart Septal Defect |
|
|
| Duane-Radial Ray Syndrome |
|
|
| Interatrial Communication |
|
|
| Dilated Cardiomyopathy |
|
|
| Atrial Fibrillation |
|
|
| Ischiocoxopodopatellar Syndrome With Or Without Pulmonary Arterial Hypertension |
|
|
| Atrioventricular Block |
|
|
| Apert Syndrome |
|
|
| Tetralogy Of Fallot |
|
|
| Digeorge Syndrome |
|
|
| Exudative Vitreoretinopathy 7 |
|
|
| Total Anomalous Pulmonary Venous Return 1 |
|
|
| Hypoplastic Right Heart Syndrome |
|
|
| Char Syndrome |
|
|
| Long Qt Syndrome |
|
|
| Tricuspid Atresia |
|
|
| Thrombocytopenia-Absent Radius Syndrome |
|
|
| Pulmonary Valve Stenosis |
|
|
| Patent Ductus Arteriosus 1 |
|
|
| Pulmonary Valve Disease |
|
|
| Ebstein Anomaly |
|
|
| Physical Disorder |
|
|
| Sinoatrial Node Disease |
|
|
| Double Outlet Right Ventricle |
|
|
| Atrial Septal Defect 5 |
|
|
| Hypoplastic Left Heart Syndrome |
|
|
| Transposition Of The Great Arteries, Dextro-Looped |
|
|
| Aortic Valve Disease 1 |
|
|
| Tricuspid Valve Disease |
|
|
| Tracheal Stenosis |
|
|
| Tracheomalacia |
|
|
| Jacobsen Syndrome |
|
|
| Townes-Brocks Syndrome |
|
|
| Brachydactyly, Type C |
|
|
| Right Atrial Isomerism |
|
|
| Noonan Syndrome With Multiple Lentigines |
|
|
| Left Ventricular Noncompaction |
|
|
| Velocardiofacial Syndrome |
|
|
| Orofaciodigital Syndrome Viii |
|
|
| Wolff-Parkinson-White Syndrome |
|
|
| Patau Syndrome |
|
|
| Lacrimoauriculodentodigital Syndrome |
|
|
| Lung Cancer |
|
|
| Chromosomal Deletion Syndrome |
|
|
| Lipoprotein Quantitative Trait Locus |
|
|
| Rasopathy |
|
|
| Heart Conduction Disease |
|
|
| Familial Atrial Fibrillation |
|
|
| Orthostatic Intolerance |
|
|
| Cleft Palate, Isolated |
|
|
| Brugada Syndrome |
|
|
| Coloboma Of Macula |
|
|
| Chromosome 22q11.2 Deletion Syndrome, Distal |
|
|
| Diaphragmatic Hernia, Congenital |
|
|
| Chromosome 1p36 Deletion Syndrome |
|
|
| Williams-Beuren Syndrome |
|
|
| Hypertrophic Cardiomyopathy |
|
|
| Noonan Syndrome 1 |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Macaca mulatta | TBX5 | VGNC | VGNC:78275 |
| Bos taurus | TBX5 | VGNC | VGNC:35671 |
| Mus musculus | TBX5 | MGD | MGI:102541 |
| Felis catus | TBX5 | VGNC | VGNC:66008 |
| Canis familiaris | TBX5 | VGNC | VGNC:47176 |
| Rattus norvegicus | TBX5 | RGD | RGD:1305702 |
| Others | TBX5 | NCBI |