COL1A2 - collagen type I alpha 2 chain Gene
Also Known as OI4; EDSCV; EDSARTH2
生物種: Homo sapiens
About COL1A2
This gene has 12 transcripts (splice variants), 204 orthologues, 37 paralogues and is associated with 18 phenotypes. Broad expression in gall bladder (RPKM 891.0), urinary bladder (RPKM 521.6) and 14 other tissues.
Summary
This gene encodes the pro-alpha2 chain of type I Collagen whose triple helix comprises two alpha1 chains and one alpha2 chain. Type I is a fibril-forming Collagen found in most connective tissues and is abundant in bone, cornea, dermis and tendon. Mutations in this gene are associated with osteogenesis imperfecta types I-IV, Ehlers-Danlos syndrome type VIIB, recessive Ehlers-Danlos syndrome Classical type, idiopathic osteoporosis, and atypical Marfan syndrome. Symptoms associated with mutations in this gene, however, tend to be less severe than mutations in the gene for the alpha1 chain of type I Collagen (COL1A1) reflecting the different role of alpha2 chains in matrix integrity. Three transcripts, resulting from the use of alternate polyadenylation signals, have been identified for this gene. [provided by R. Dalgleish, Feb 2008]
COL1A2 Products (1)
| mRNA | Protein | Name |
|---|---|---|
| NM_000089.4 | NP_000080.2 | collagen alpha-2(I) chain precursor |
| Molecular Function GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| enables identical protein binding |
IDA
IDA: Inferred from direct assay
|
17211858 | GOA |
| enables platelet-derived growth factor binding |
IDA
IDA: Inferred from direct assay
|
8900172 | GOA |
| enables protease binding |
IPI
IPI: Inferred from physical interaction
|
19932771 | GOA |
| enables protein binding |
IPI
IPI: Inferred from physical interaction
|
18375391 | GOA |
| enables protein-macromolecule adaptor activity |
IMP
IMP: Inferred from mutant phenotype
|
18375391 | GOA |
| Biological Process GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| involved in Rho protein signal transduction |
IDA
IDA: Inferred from direct assay
|
17217948 | GOA |
| involved in blood vessel development |
IMP
IMP: Inferred from mutant phenotype
|
17211858 | GOA |
| involved in collagen fibril organization |
IMP
IMP: Inferred from mutant phenotype
|
17211858 | GOA |
| involved in regulation of blood pressure |
IMP
IMP: Inferred from mutant phenotype
|
17334644 | GOA |
| involved in skeletal system development |
IMP
IMP: Inferred from mutant phenotype
|
8841196 | GOA |
| involved in skin morphogenesis |
IMP
IMP: Inferred from mutant phenotype
|
17211858 | GOA |
| involved in transforming growth factor beta receptor signaling pathway |
IDA
IDA: Inferred from direct assay
|
17217948 | GOA |
| Cellular Component GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| part of collagen type I trimer |
IDA
IDA: Inferred from direct assay
|
18375391 | GOA |
| part of collagen type I trimer |
IMP
IMP: Inferred from mutant phenotype
|
17955022 | GOA |
| part of collagen type I trimer |
IPI
IPI: Inferred from physical interaction
|
26848503 | GOA |
| located in extracellular space |
IDA
IDA: Inferred from direct assay
|
18375391 | GOA |
COL1A2 Protein Structure
Collagen: Collagen triple helix repeat (20 copies) (32 - 75)
Collagen: Collagen triple helix repeat (20 copies) (91 - 149)
Collagen: Collagen triple helix repeat (20 copies) (148 - 205)
Collagen: Collagen triple helix repeat (20 copies) (469 - 527)
Collagen: Collagen triple helix repeat (20 copies) (604 - 661)
Collagen: Collagen triple helix repeat (20 copies) (1045 - 1102)
COLFI: Fibrillar collagen C-terminal domain (1150 - 1365)
- 0
- 300
- 600
- 900
- 1200
- 1366 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
collagen alpha-2(I) chain |
|
COL1A2 Protein-protein interaction Information
|
Type
|
タンパク質名 | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | 参考文献 |
|---|---|---|---|---|---|---|---|
|
Intra
|
COL1A2 | P08123 | UBQLN1 | Homo sapiens | Q9UMX0-2 | 26871637 | |
|
Intra
|
COL1A2 | P08123 | UBQLN1 | Homo sapiens | Q9UMX0-2 | 25416956 | |
|
Intra
|
COL1A2 | P08123 | UBQLN1 | Homo sapiens | Q9UMX0-2 | 26871637 | |
|
Intra
|
COL1A2 | P08123 | UBQLN1 | Homo sapiens | Q9UMX0-2 | 26871637 | |
|
Intra
|
COL1A2 | P08123 | KCNIP4 | Homo sapiens | Q6PIL6 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | KCNIP4 | Homo sapiens | Q6PIL6 | 26871637 | |
|
Intra
|
COL1A2 | P08123 | KCNIP4 | Homo sapiens | Q6PIL6 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | KCNIP4 | Homo sapiens | Q6PIL6 | 26871637 | |
|
Intra
|
COL1A2 | P08123 | KCNIP4 | Homo sapiens | Q6PIL6 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | KCNIP4 | Homo sapiens | Q6PIL6 | 26871637 | |
|
Intra
|
COL1A2 | P08123 | SGTA | Homo sapiens | O43765 | 25416956 | |
|
Intra
|
COL1A2 | P08123 | SGTA | Homo sapiens | O43765 | 26871637 | |
|
Intra
|
COL1A2 | P08123 | SGTA | Homo sapiens | O43765 | 25416956 | |
|
Intra
|
COL1A2 | P08123 | SGTA | Homo sapiens | O43765 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | SGTA | Homo sapiens | O43765 | 26871637 | |
|
Intra
|
COL1A2 | P08123 | SGTA | Homo sapiens | O43765 | 25416956 | |
|
Intra
|
COL1A2 | P08123 | SGTA | Homo sapiens | O43765 | 26871637 | |
|
Intra
|
COL1A2 | P08123 | SGTA | Homo sapiens | O43765 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | SMARCD1 | Homo sapiens | Q96GM5 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | MESD | Homo sapiens | Q14696 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | MESD | Homo sapiens | Q14696 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | MESD | Homo sapiens | Q14696 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | UBQLN1 | Homo sapiens | Q9UMX0 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | UBQLN1 | Homo sapiens | Q9UMX0 | 25416956 | |
|
Intra
|
COL1A2 | P08123 | UBQLN1 | Homo sapiens | Q9UMX0 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | UBQLN1 | Homo sapiens | Q9UMX0 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | SGTB | Homo sapiens | Q96EQ0 | 26871637 | |
|
Intra
|
COL1A2 | P08123 | SGTB | Homo sapiens | Q96EQ0 | 26871637 | |
|
Intra
|
COL1A2 | P08123 | SGTB | Homo sapiens | Q96EQ0 | 26871637 | |
|
Intra
|
COL1A2 | P08123 | UBQLN2 | Homo sapiens | Q9UHD9 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | UBQLN2 | Homo sapiens | Q9UHD9 | 32296183 | |
|
Intra
|
COL1A2 | P08123 | UBQLN2 | Homo sapiens | Q9UHD9 | 32296183 |
COL1A2 抗体
| 製品番号 | 製品名 | アプリケーション | 反応性 |
|---|---|---|---|
| HY-P80627 | Collagen I alpha 2 Antibody | WB, IHC-F, IHC-P, ICC/IF, ELISA | Human, Mouse, Rat |
| HY-P83998 | Collagen I alpha 2 Antibody (YA3695) | WB, ICC/IF, FC, ELISA | Human, Mouse, Rat, Monkey |
| HY-P83998A | Collagen I alpha 2 Antibody (YA3695)(PBS only) | WB, ICC/IF, FC, ELISA | Human, Mouse, Rat, Monkey |
| HY-P85777 | Collagen I Antibody (YA5469) | ICC/IF, IHC-P | Human, Mouse, Rat |
関連疾患
| Diseases | Alias | |
|---|---|---|
| Osteogenesis Imperfecta, Type Iii |
|
|
| Osteogenesis Imperfecta, Type Iv |
|
|
| Osteogenesis Imperfecta, Type Ii |
|
|
| Ehlers-Danlos Syndrome, Cardiac Valvular Type |
|
|
| Combined Osteogenesis Imperfecta And Ehlers-Danlos Syndrome 2 |
|
|
| Ehlers-Danlos Syndrome, Arthrochalasia Type, 2 |
|
|
| Osteoporosis |
|
|
| Osteogenesis Imperfecta, Type I |
|
|
| Brittle Bone Disorder |
|
|
| Dentinogenesis Imperfecta |
|
|
| Ehlers-Danlos Syndrome, Classic Type, 1 |
|
|
| Ehlers-Danlos/Osteogenesis Imperfecta Syndrome |
|
|
| Ehlers-Danlos Syndrome |
|
|
| Ehlers-Danlos Syndrome, Arthrochalasia Type, 1 |
|
|
| Classic Ehlers-Danlos Syndrome |
|
|
| High Bone Mass Osteogenesis Imperfecta |
|
|
| Primary Bone Dysplasia |
|
|
| Osteochondrodysplasia |
|
|
| Marfan Syndrome |
|
|
| Otosclerosis |
|
|
| X-Linked Alport Syndrome |
|
|
| Idiopathic Scoliosis |
|
|
| Bone Development Disease |
|
|
| Scoliosis |
|
|
| Chiari Malformation |
|
|
| Scirrhous Adenocarcinoma |
|
|
| Spinal Stenosis |
|
|
| Alport Syndrome |
|
|
| Caffey Disease |
|
|
| Oral Submucous Fibrosis |
|
|
| Pelvic Organ Prolapse |
|
|
| Breast Scirrhous Carcinoma |
|
|
| Bruck Syndrome |
|
|
| Systemic Scleroderma |
|
|
| Scleroderma, Familial Progressive |
|
|
| Osteogenesis Imperfecta, Type Xiv |
|
|
| Pulmonary Fibrosis |
|
|
| Syndromic X-Linked Intellectual Disability Cabezas Type |
|
|
| Fibrogenesis Imperfecta Ossium |
|
|
| Connective Tissue Disease |
|
|
| Osteogenesis Imperfecta, Type V |
|
|
| Spondyloepimetaphyseal Dysplasia, Strudwick Type |
|
|
| Osteogenesis Imperfecta, Type Vi |
|
|
| Endosteal Hyperostosis, Autosomal Dominant |
|
|
| Stickler Syndrome |
|
|
| Collagen Disease |
|
|
| Osteoporosis, Juvenile |
|
|
| Localized Scleroderma |
|
|
| Dentin Dysplasia |
|
|
| Dental Fluorosis |
|
|
| Hypophosphatasia, Adult |
|
|
| Cole-Carpenter Syndrome |
|
|
| Hypermobility Syndrome |
|
|
| Scheuermann Disease |
|
|
| Beach Ear |
|
|
| Bone Structure Disease |
|
|
| Amebiasis |
|
|
| Achondrogenesis |
|
|
| Split-Hand/Foot Malformation 1 With Sensorineural Hearing Loss, Autosomal Recessive |
|
|
| Osteogenesis Imperfecta, Type Xi |
|
|
| Cerebral Palsy |
|
|
| Bone Remodeling Disease |
|
|
| Bone Resorption Disease |
|
|
| Loeys-Dietz Syndrome |
|
|
| Gastric Cancer |
|
|
| Orthostatic Intolerance |
|
|
| Distal Arthrogryposis |
|
|
| Medulloblastoma |
|
|
| Tooth Agenesis |
|
|
| Limited Scleroderma |
|
|
| Interstitial Lung Disease 2 |
|
|
| Aortic Aneurysm, Familial Thoracic 1 |
|
|
| Dilated Cardiomyopathy |
|
|
Orthologs Information
| 生物種 | Symbol | 由来 | ID |
|---|---|---|---|
| Canis familiaris | COL1A2 | VGNC | VGNC:39465 |
| Bos taurus | COL1A2 | VGNC | VGNC:27561 |
| Felis catus | COL1A2 | VGNC | VGNC:78411 |
| Mus musculus | COL1A2 | MGD | MGI:88468 |
| Rattus norvegicus | COL1A2 | RGD | RGD:621351 |
| Macaca mulatta | COL1A2 | VGNC | VGNC:81292 |
| Others | COL1A2 | NCBI |