LMO3 - LIM domain only 3 Gene

Also Known as RBTN3; RHOM3; RBTNL2; Rhom-3

Species: Homo sapiens

Gene Type: protein coding
Gene ID: 55885

About LMO3

Cytogenetic location: 12p12.3 Genomic coordinates (GRCh38): 12:16,548,372-16,610,174 (from NCBI)

This gene has 34 transcripts (splice variants), 205 orthologues and 20 paralogues. Biased expression in brain (RPKM 41.7), lung (RPKM 13.9) and 7 other tissues.

Summary

The protein encoded by this gene belongs to the rhombotin family of cysteine-rich LIM domain oncogenes. This gene is predominantly expressed in the brain. Related family members, LMO1 and LMO2 on chromosome 11, have been reported to be involved in chromosomal translocations in T-cell leukemia. Many alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Aug 2011]

LMO3 Products (7)

mRNA Protein Name
NM_001001395.2 NP_001001395.1 LIM domain only protein 3 isoform 1
NM_001243609.1 NP_001230538.1 LIM domain only protein 3 isoform 1
NM_001243610.1 NP_001230539.1 LIM domain only protein 3 isoform 1
NM_001243611.1 NP_001230540.1 LIM domain only protein 3 isoform 2
NM_001243612.1 NP_001230541.1 LIM domain only protein 3 isoform 3
NM_001243613.1 NP_001230542.1 LIM domain only protein 3 isoform 4
NM_018640.5 NP_061110.2 LIM domain only protein 3 isoform 1
Molecular Function GO Annotation Evidence Verweise Source
enables protein binding IPI
IPI: Inferred from physical interaction
16189514 GOA
Cellular Component GO Annotation Evidence Verweise Source
located in cytoplasm IDA
IDA: Inferred from direct assay
23823477 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

LMO3 Protein Structure

LIM

LIM: LIM domain (13 - 71)

LIM

LIM: LIM domain (77 - 132)

  • 0
  • 100
  • 145 a.a.
Protein Preferred Names Protein Names

LIM domain only protein 3

  • LIM domain only 3 (rhombotin-like 2)

LMO3 Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method Verweise
Intra
LMO3 Q8TAP4 NUTM1 Homo sapiens Q86Y26 25416956
Intra
LMO3 Q8TAP4 NUTM1 Homo sapiens Q86Y26 25416956
Intra
LMO3 Q8TAP4 SP4 Homo sapiens Q02446 25416956
Intra
LMO3 Q8TAP4 FOS Homo sapiens Q6FG41 25416956
Intra
LMO3 Q8TAP4 FBLIM1 Homo sapiens Q8WUP2 31515488
Intra
LMO3 Q8TAP4 FBLIM1 Homo sapiens Q8WUP2 25416956
Intra
LMO3 Q8TAP4 FBLIM1 Homo sapiens Q8WUP2 25416956
Intra
LMO3 Q8TAP4 FBLIM1 Homo sapiens Q8WUP2 25416956
Intra
LMO3 Q8TAP4 TAX1BP1 Homo sapiens Q86VP1 25416956
Intra
LMO3 Q8TAP4 TAX1BP1 Homo sapiens Q86VP1 25416956
Intra
LMO3 Q8TAP4 LDB1 Homo sapiens Q86U70 33961781
Intra
LMO3 Q8TAP4 CBY2 Homo sapiens Q8NA61 25416956
Intra
LMO3 Q8TAP4 CBY2 Homo sapiens Q8NA61 25416956
Intra
LMO3 Q8TAP4 FAM131C Homo sapiens Q96AQ9 25416956
Intra
LMO3 Q8TAP4 BANP Homo sapiens Q8N9N5 25416956
Intra
LMO3 Q8TAP4 BANP Homo sapiens Q8N9N5 25416956
Intra
LMO3 Q8TAP4 IKZF1 Homo sapiens Q13422 25416956
Intra
LMO3 Q8TAP4 IKZF1 Homo sapiens Q13422 25416956
Intra
LMO3 Q8TAP4 IKZF1 Homo sapiens Q13422 25416956
Intra
LMO3 Q8TAP4 SAMD3 Homo sapiens Q8N6K7 25416956
Intra
LMO3 Q8TAP4 SAMD3 Homo sapiens Q8N6K7 25416956
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases Alias
Chief Cell Adenoma
  • Chief Cell Adenoma Of Parathyroid Gland

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Mus musculus LMO3 MGD MGI:102810
Bos taurus LMO3 VGNC VGNC:30935
Macaca mulatta LMO3 VGNC VGNC:100072
Felis catus LMO3 VGNC VGNC:68071
Canis familiaris LMO3 VGNC VGNC:42723
Rattus norvegicus LMO3 RGD RGD:1561357
Others LMO3 NCBI