PDCD6 - programmed cell death 6 Gene
Also Known as ALG2; ALG-2; PEF1B
生物種: Homo sapiens
About PDCD6
This gene has 12 transcripts (splice variants), 189 orthologues and 20 paralogues. Ubiquitous expression in colon (RPKM 23.5), adrenal (RPKM 21.4) and 25 other tissues.
Summary
This gene encodes a calcium-binding protein belonging to the penta-EF-hand protein family. Calcium binding is important for homodimerization and for conformational changes required for binding to Other protein partners. This gene product participates in T cell receptor-, Fas-, and glucocorticoid-induced programmed cell death. In mice deficient for this gene product, however, Apoptosis was not blocked suggesting this gene product is functionally redundant. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is also located on the short arm of chromosome 5. [provided by RefSeq, May 2012]
PDCD6 Products (5)
| mRNA | Protein | Name |
|---|---|---|
| NM_001267556.2 | NP_001254485.1 | programmed cell death protein 6 isoform 2 |
| NM_001267557.2 | NP_001254486.1 | programmed cell death protein 6 isoform 3 |
| NM_001267558.2 | NP_001254487.1 | programmed cell death protein 6 isoform 4 |
| NM_001267559.2 | NP_001254488.1 | programmed cell death protein 6 isoform 5 |
| NM_013232.4 | NP_037364.1 | programmed cell death protein 6 isoform 1 |
| Cellular Component GO Annotation | Evidence | 参考文献 | 由来 |
|---|---|---|---|
| part of COPII vesicle coat |
IDA
IDA: Inferred from direct assay
|
27716508 | GOA |
| part of Cul3-RING ubiquitin ligase complex |
IDA
IDA: Inferred from direct assay
|
27716508 | GOA |
| located in cytoplasm |
IDA
IDA: Inferred from direct assay
|
11278427 | GOA |
| located in cytoplasmic vesicle |
IDA
IDA: Inferred from direct assay
|
21122810 | GOA |
| located in endoplasmic reticulum |
IDA
IDA: Inferred from direct assay
|
17196169 | GOA |
| located in endoplasmic reticulum exit site |
IDA
IDA: Inferred from direct assay
|
27813252 | GOA |
| located in endoplasmic reticulum exit site |
IMP
IMP: Inferred from mutant phenotype
|
16957052 | GOA |
| located in nucleus |
IDA
IDA: Inferred from direct assay
|
11278427 | GOA |
| located in perinuclear region of cytoplasm |
IDA
IDA: Inferred from direct assay
|
17196169 | GOA |
PDCD6 Protein Structure
EF-hand_8: EF-hand domain pair (40 - 89)
EF-hand_7: EF-hand domain pair (96 - 154)
- 0
- 100
- 191 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
programmed cell death protein 6 |
|
PDCD6 Protein-protein interaction Information
|
Type
|
タンパク質名 | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | 参考文献 |
|---|---|---|---|---|---|---|---|
|
Intra
|
PDCD6 | O75340 | KDR | Homo sapiens | P35968 | 21893193 | |
|
Intra
|
PDCD6 | O75340 | KDR | Homo sapiens | P35968 | 21893193 | |
|
Intra
|
PDCD6 | O75340 | KDR | Homo sapiens | P35968 | 21893193 | |
|
Intra
|
PDCD6 | O75340 | ANXA11 | Homo sapiens | Q5T0G8 | 25416956 | |
|
Intra
|
PDCD6 | O75340 | ANXA11 | Homo sapiens | Q5T0G8 | 25416956 | |
|
Intra
|
PDCD6 | O75340 | ANXA11 | Homo sapiens | Q5T0G8 | 25416956 | |
|
Intra
|
PDCD6 | O75340 | SEC31A | Homo sapiens | O94979 | 17196169 | |
|
Intra
|
PDCD6 | O75340 | SEC31A | Homo sapiens | O94979 | 35271311 | |
|
Intra
|
PDCD6 | O75340 | SEC31A | Homo sapiens | O94979 | 17196169 | |
|
Intra
|
PDCD6 | O75340 | SEC31A | Homo sapiens | O94979 | 18256029 | |
|
Intra
|
PDCD6 | O75340 | VPS37C | Homo sapiens | A5D8V6 | 25416956 | |
|
Intra
|
PDCD6 | O75340 | VPS37C | Homo sapiens | A5D8V6 | 25416956 | |
|
Intra
|
PDCD6 | O75340 | BAG4 | Homo sapiens | O95429 | 32296183 | |
|
Intra
|
PDCD6 | O75340 | BAG4 | Homo sapiens | O95429 | 32296183 | |
|
Intra
|
PDCD6 | O75340 | BAG4 | Homo sapiens | O95429 | 32296183 | |
|
Intra
|
PDCD6 | O75340 | PDCD6IP | Homo sapiens | Q8WUM4 | 18940611 | |
|
Intra
|
PDCD6 | O75340 | PDCD6IP | Homo sapiens | Q8WUM4 | 18940611 | |
|
Intra
|
PDCD6 | O75340 | PDCD6IP | Homo sapiens | Q8WUM4 | 17196169 | |
|
Intra
|
PDCD6 | O75340 | PDCD6IP | Homo sapiens | Q8WUM4 | 31515488 | |
|
Intra
|
PDCD6 | O75340 | PDCD6IP | Homo sapiens | Q8WUM4 | 17196169 | |
|
Intra
|
PDCD6 | O75340 | PDCD6IP | Homo sapiens | Q8WUM4 | 18940611 | |
|
Intra
|
PDCD6 | O75340 | PDCD6IP | Homo sapiens | Q8WUM4 | 18256029 | |
|
Intra
|
PDCD6 | O75340 | PDCD6IP | Homo sapiens | Q8WUM4 | 35271311 | |
|
Intra
|
PDCD6 | O75340 | PEF1 | Homo sapiens | Q9UBV8 | 35271311 | |
|
Intra
|
PDCD6 | O75340 | PEF1 | Homo sapiens | Q9UBV8 | 16189514 | |
|
Intra
|
PDCD6 | O75340 | PEF1 | Homo sapiens | Q9UBV8 | 32296183 | |
|
Intra
|
PDCD6 | O75340 | PEF1 | Homo sapiens | Q9UBV8 | 25416956 | |
|
Intra
|
PDCD6 | O75340 | PEF1 | Homo sapiens | Q9UBV8 | 21988832 | |
|
Intra
|
PDCD6 | O75340 | PEF1 | Homo sapiens | Q9UBV8 | 25416956 | |
|
Intra
|
PDCD6 | O75340 | DAPK1 | Homo sapiens | P53355 | 16132846 | |
|
Intra
|
PDCD6 | O75340 | DCTN2 | Homo sapiens | Q13561 | 26950892 | |
|
Intra
|
PDCD6 | O75340 | ANXA11 | Homo sapiens | P50995 | 31515488 | |
|
Intra
|
PDCD6 | O75340 | PTPN23 | Homo sapiens | Q9H3S7 | 17174262 | |
|
Intra
|
PDCD6 | O75340 | PTPN23 | Homo sapiens | Q9H3S7 | 17174262 | |
|
Intra
|
PDCD6 | O75340 | HEBP2 | Homo sapiens | Q9Y5Z4 | 25416956 | |
|
Intra
|
PDCD6 | O75340 | HEBP2 | Homo sapiens | Q9Y5Z4 | 32296183 | |
|
Intra
|
PDCD6 | O75340 | HEBP2 | Homo sapiens | Q9Y5Z4 | 25416956 | |
|
Intra
|
PDCD6 | O75340 | HEBP2 | Homo sapiens | Q9Y5Z4 | 35271311 | |
|
Intra
|
PDCD6 | O75340 | HEBP2 | Homo sapiens | Q9Y5Z4 | 16189514 | |
|
Intra
|
PDCD6 | O75340 | PLSCR3 | Homo sapiens | Q9NRY6 | 18256029 | |
|
Intra
|
PDCD6 | O75340 | PLSCR3 | Homo sapiens | Q9NRY6 | 18256029 | |
|
Intra
|
PDCD6 | O75340 | PLSCR3 | Homo sapiens | Q9NRY6 | 18256029 | |
|
Intra
|
PDCD6 | O75340 | PLSCR3 | Homo sapiens | Q9NRY6 | 18256029 | |
|
Intra
|
PDCD6 | O75340 | PLSCR3 | Homo sapiens | Q9NRY6 | 18256029 | |
|
Intra
|
PDCD6 | O75340 | PLSCR3 | Homo sapiens | Q9NRY6 | 18256029 |
PDCD6 抗体
| 製品番号 | 製品名 | アプリケーション | 反応性 |
|---|---|---|---|
| HY-P81520 | PDCD6/ALG-2 Antibody (YA1265) | IHC-P | Human |
| HY-P81520A | PDCD6/ALG-2 Antibody (YA1265)(PBS only) | IHC-P | Human |
関連疾患
| Diseases | Alias | |
|---|---|---|
| Ocular Melanoma |
|
|
Orthologs Information
| 生物種 | Symbol | 由来 | ID |
|---|---|---|---|
| Bos taurus | PDCD6 | VGNC | VGNC:32663 |
| Canis familiaris | PDCD6 | VGNC | VGNC:44340 |
| Rattus norvegicus | PDCD6 | RGD | RGD:1311239 |
| Felis catus | PDCD6 | VGNC | VGNC:102284 |
| Mus musculus | PDCD6 | MGD | MGI:109283 |
| Others | PDCD6 | NCBI |