PDCD6IP - programmed cell death 6 interacting protein Gene
Also Known as AIP1; ALIX; HP95; DRIP4; MCPH29
Species: Homo sapiens
About PDCD6IP
This gene has 18 transcripts (splice variants) and 45 orthologues. Ubiquitous expression in colon (RPKM 28.2), esophagus (RPKM 23.0) and 25 other tissues.
Summary
This gene encodes a protein that functions within the ESCRT pathway in the abscission stage of cytokinesis, in intralumenal endosomal vesicle formation, and in enveloped virus budding. Studies using mouse cells have shown that overexpression of this protein can block Apoptosis. In addition, the product of this gene binds to the product of the PDCD6 gene, a protein required for Apoptosis, in a calcium-dependent manner. This gene product also binds to endophilins, proteins that regulate membrane shape during endocytosis. Overexpression of this gene product and endophilins results in cytoplasmic vacuolization, which may be partly responsible for the protection against cell death. Several alternatively spliced transcript variants encoding different isoforms have been found for this gene. Related pseudogenes have been identified on chromosome 15. [provided by RefSeq, Jan 2012]
PDCD6IP Products (3)
| mRNA | Protein | Name |
|---|---|---|
| NM_001162429.3 | NP_001155901.1 | programmed cell death 6-interacting protein isoform 2 |
| NM_001256192.2 | NP_001243121.1 | programmed cell death 6-interacting protein isoform 3 |
| NM_013374.6 | NP_037506.2 | programmed cell death 6-interacting protein isoform 1 |
PDCD6IP Protein Structure
BRO1: BRO1-like domain (4 - 382)
ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HIV (409 - 702)
- 0
- 200
- 400
- 600
- 800
- 868 a.a.
| Protein Preferred Names | Protein Names | |
|---|---|---|
|
programmed cell death 6-interacting protein |
|
PDCD6IP Protein-protein interaction Information
|
Type
|
Protein Name | Protein ID | Interactor | Interactor Species | Interactor ID | Detection Method | References |
|---|---|---|---|---|---|---|---|
|
Intra
|
PDCD6IP | Q8WUM4 | CHMP4C | Homo sapiens | Q96CF2 | 18511562 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CHMP4C | Homo sapiens | Q96CF2 | 18511562 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CD2AP | Homo sapiens | Q9Y5K6 | 17853893 | |
|
Intra
|
PDCD6IP | Q8WUM4 | HCK | Homo sapiens | P08631 | 20670214 | |
|
Intra
|
PDCD6IP | Q8WUM4 | HCK | Homo sapiens | P08631 | 22641034 | |
|
Intra
|
PDCD6IP | Q8WUM4 | HCK | Homo sapiens | P08631 | 22641034 | |
|
Intra
|
PDCD6IP | Q8WUM4 | PDCD6 | Homo sapiens | O75340 | 18940611 | |
|
Intra
|
PDCD6IP | Q8WUM4 | PDCD6 | Homo sapiens | O75340 | 18256029 | |
|
Intra
|
PDCD6IP | Q8WUM4 | PDCD6 | Homo sapiens | O75340 | 18256029 | |
|
Cross
|
PDCD6IP | Q8WUM4 | Hoxa1 | Mus musculus | P09022 | 23088713 | |
|
Intra
|
PDCD6IP | Q8WUM4 | FYN | Homo sapiens | P06241 | 22641034 | |
|
Cross
|
PDCD6IP | Q8WUM4 | nef | Human immunodeficiency virus | Q90VU7 | 25118280 | |
|
Cross
|
PDCD6IP | Q8WUM4 | nef | Human immunodeficiency virus | Q90VU7 | 25118280 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CEP55 | Homo sapiens | Q53EZ4 | 25416956 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CEP55 | Homo sapiens | Q53EZ4 | 17853893 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CEP55 | Homo sapiens | Q53EZ4 | 17853893 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CEP55 | Homo sapiens | Q53EZ4 | 25416956 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CEP55 | Homo sapiens | Q53EZ4 | 35271311 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CEP55 | Homo sapiens | Q53EZ4 | 31515488 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CEP55 | Homo sapiens | Q53EZ4 | 18940611 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CEP55 | Homo sapiens | Q53EZ4 | 25416956 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CHMP4A | Homo sapiens | Q9BY43 | 18511562 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CHMP4A | Homo sapiens | Q9BY43 | 18511562 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CHMP4B | Homo sapiens | Q9H444 | 18511562 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CHMP4B | Homo sapiens | Q9H444 | 18511562 | |
|
Intra
|
PDCD6IP | Q8WUM4 | CHMP4B | Homo sapiens | Q9H444 | 21889351 | |
|
Cross
|
PDCD6IP | Q8WUM4 | Chmp4b | Mus musculus | Q9D8B3 | 25686249 | |
|
Cross
|
PDCD6IP | Q8WUM4 | gag | Human immunodeficiency virus | P03347 | 17350572 | |
|
Cross
|
PDCD6IP | Q8WUM4 | gag | Equine infectious anemia virus | P69730 | 17350572 | |
|
Cross
|
PDCD6IP | Q8WUM4 | gag | Human immunodeficiency virus | O91079 | 37219487 | |
|
Cross
|
PDCD6IP | Q8WUM4 | gag | Human immunodeficiency virus | O91079 | 37100772 | |
|
Cross
|
PDCD6IP | Q8WUM4 | P29991-PRO_0000308465 | Dengue virus type 2 | P29991-PRO_0000308465 | 21911577 |
PDCD6IP Antibodies
| Cat. No. | Product Name | Application | Reactivity |
|---|---|---|---|
| HY-P86637 | ALIX Antibody (YA6329) | WB, IHC-P, ICC/IF, IP, ELISA | Human, Mouse, Rat |
Related Diseases
| Diseases | Alias | |
|---|---|---|
| Microcephaly 29, Primary, Autosomal Recessive |
|
|
| Microcephaly |
|
|
Orthologs Information
| Species | Symbol | Source | ID |
|---|---|---|---|
| Mus musculus | PDCD6IP | MGD | MGI:1333753 |
| Felis catus | PDCD6IP | VGNC | VGNC:68746 |
| Macaca mulatta | PDCD6IP | VGNC | VGNC:75795 |
| Rattus norvegicus | PDCD6IP | RGD | RGD:68357 |
| Bos taurus | PDCD6IP | VGNC | VGNC:32664 |
| Canis familiaris | PDCD6IP | VGNC | VGNC:44341 |
| Others | PDCD6IP | NCBI |